Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TUBP50607 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TUBP50607 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TUBP50607 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TUBP50607 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.17■□□□□ 0.66
TUBP50607 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
TUBP50607 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TUBP50607 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TUBP50607 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TUBP50607 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TUBP50607 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TUBP50607 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.17■□□□□ 0.66
TUBP50607 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.17■□□□□ 0.66
TUBP50607 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.17■□□□□ 0.66
TUBP50607 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TUBP50607 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TUBP50607 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.17■□□□□ 0.66
TUBP50607 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TUBP50607 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
TUBP50607 MYLKP1-201ENST00000509077 1580 ntBASIC19.16■□□□□ 0.66
TUBP50607 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TUBP50607 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TUBP50607 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.16■□□□□ 0.66
TUBP50607 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TUBP50607 CHCHD2P8-201ENST00000429873 447 ntBASIC19.16■□□□□ 0.66
TUBP50607 AC008687.5-201ENST00000593746 558 ntBASIC19.16■□□□□ 0.66
TUBP50607 AL390719.2-201ENST00000606993 987 ntBASIC19.16■□□□□ 0.66
TUBP50607 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.16■□□□□ 0.66
TUBP50607 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TUBP50607 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TUBP50607 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TUBP50607 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TUBP50607 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TUBP50607 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TUBP50607 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TUBP50607 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TUBP50607 AC009102.3-201ENST00000623118 1491 ntBASIC19.16■□□□□ 0.66
TUBP50607 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TUBP50607 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TUBP50607 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TUBP50607 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.15■□□□□ 0.66
TUBP50607 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.15■□□□□ 0.66
TUBP50607 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.15■□□□□ 0.66
TUBP50607 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
TUBP50607 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
TUBP50607 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TUBP50607 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TUBP50607 IGHGP-201ENST00000390555 1178 ntBASIC19.15■□□□□ 0.66
TUBP50607 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TUBP50607 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.15■□□□□ 0.66
TUBP50607 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TUBP50607 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TUBP50607 AC005332.3-201ENST00000589904 676 ntBASIC19.15■□□□□ 0.66
TUBP50607 GPR32P1-201ENST00000601788 811 ntBASIC19.15■□□□□ 0.66
TUBP50607 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.15■□□□□ 0.66
TUBP50607 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
TUBP50607 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.15■□□□□ 0.66
TUBP50607 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TUBP50607 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TUBP50607 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TUBP50607 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.15■□□□□ 0.66
TUBP50607 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
TUBP50607 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
TUBP50607 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TUBP50607 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
TUBP50607 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
TUBP50607 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TUBP50607 Z83836.1-201ENST00000624605 1642 ntBASIC19.14■□□□□ 0.66
TUBP50607 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
TUBP50607 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TUBP50607 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
TUBP50607 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.14■□□□□ 0.66
TUBP50607 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC19.14■□□□□ 0.66
TUBP50607 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC19.14■□□□□ 0.66
TUBP50607 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TUBP50607 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.66
TUBP50607 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TUBP50607 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TUBP50607 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
TUBP50607 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
TUBP50607 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.65
TUBP50607 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TUBP50607 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TUBP50607 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
TUBP50607 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TUBP50607 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TUBP50607 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.14■□□□□ 0.65
TUBP50607 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.14■□□□□ 0.65
TUBP50607 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TUBP50607 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
TUBP50607 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
TUBP50607 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.14■□□□□ 0.65
TUBP50607 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.14■□□□□ 0.65
TUBP50607 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
TUBP50607 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
TUBP50607 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TUBP50607 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TUBP50607 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TUBP50607 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TUBP50607 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms