Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC20.46■□□□□ 0.87
CENPFP49454 AL513190.1-201ENST00000621254 727 ntBASIC20.46■□□□□ 0.87
CENPFP49454 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CENPFP49454 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CENPFP49454 MEG3-211ENST00000452514 461 ntTSL 3 BASIC20.46■□□□□ 0.87
CENPFP49454 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC20.46■□□□□ 0.87
CENPFP49454 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC20.46■□□□□ 0.87
CENPFP49454 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CENPFP49454 C20orf181-201ENST00000623918 480 ntBASIC20.46■□□□□ 0.87
CENPFP49454 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CENPFP49454 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CENPFP49454 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CENPFP49454 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.46■□□□□ 0.87
CENPFP49454 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.46■□□□□ 0.87
CENPFP49454 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC20.46■□□□□ 0.87
CENPFP49454 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.46■□□□□ 0.87
CENPFP49454 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
CENPFP49454 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CENPFP49454 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
CENPFP49454 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.45■□□□□ 0.86
CENPFP49454 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CENPFP49454 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
CENPFP49454 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CENPFP49454 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
CENPFP49454 LAGE3P1-201ENST00000425356 484 ntBASIC20.45■□□□□ 0.86
CENPFP49454 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CENPFP49454 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC20.45■□□□□ 0.86
CENPFP49454 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CENPFP49454 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CENPFP49454 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.45■□□□□ 0.86
CENPFP49454 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.45■□□□□ 0.86
CENPFP49454 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CENPFP49454 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.45■□□□□ 0.86
CENPFP49454 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CENPFP49454 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
CENPFP49454 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CENPFP49454 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CENPFP49454 GSAP-205ENST00000430584 600 ntTSL 5 BASIC20.45■□□□□ 0.86
CENPFP49454 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CENPFP49454 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC20.45■□□□□ 0.86
CENPFP49454 AC068472.1-201ENST00000474589 881 ntBASIC20.45■□□□□ 0.86
CENPFP49454 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC20.45■□□□□ 0.86
CENPFP49454 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC20.45■□□□□ 0.86
CENPFP49454 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CENPFP49454 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.44■□□□□ 0.86
CENPFP49454 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
CENPFP49454 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CENPFP49454 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CENPFP49454 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CENPFP49454 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CENPFP49454 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CENPFP49454 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC20.44■□□□□ 0.86
CENPFP49454 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CENPFP49454 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CENPFP49454 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.44■□□□□ 0.86
CENPFP49454 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CENPFP49454 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CENPFP49454 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CENPFP49454 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC20.44■□□□□ 0.86
CENPFP49454 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.44■□□□□ 0.86
CENPFP49454 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CENPFP49454 STOM-202ENST00000347359 870 ntTSL 2 BASIC20.44■□□□□ 0.86
CENPFP49454 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CENPFP49454 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC20.44■□□□□ 0.86
CENPFP49454 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CENPFP49454 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CENPFP49454 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC20.44■□□□□ 0.86
CENPFP49454 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CENPFP49454 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.44■□□□□ 0.86
CENPFP49454 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CENPFP49454 AC093484.2-201ENST00000580996 2166 ntBASIC20.44■□□□□ 0.86
CENPFP49454 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.44■□□□□ 0.86
CENPFP49454 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CENPFP49454 AL035252.4-201ENST00000624174 288 ntBASIC20.44■□□□□ 0.86
CENPFP49454 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.44■□□□□ 0.86
CENPFP49454 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.44■□□□□ 0.86
CENPFP49454 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC20.43■□□□□ 0.86
CENPFP49454 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CENPFP49454 SDHAP2-201ENST00000455183 2001 ntBASIC20.43■□□□□ 0.86
CENPFP49454 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CENPFP49454 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CENPFP49454 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CENPFP49454 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC20.43■□□□□ 0.86
CENPFP49454 AC097374.2-201ENST00000618617 1306 ntBASIC20.43■□□□□ 0.86
CENPFP49454 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC20.43■□□□□ 0.86
CENPFP49454 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC20.43■□□□□ 0.86
CENPFP49454 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC20.43■□□□□ 0.86
CENPFP49454 AC105339.3-201ENST00000560043 636 ntBASIC20.43■□□□□ 0.86
CENPFP49454 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC20.43■□□□□ 0.86
CENPFP49454 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC20.43■□□□□ 0.86
CENPFP49454 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
CENPFP49454 AP000867.4-201ENST00000641616 219 ntBASIC20.43■□□□□ 0.86
CENPFP49454 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CENPFP49454 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CENPFP49454 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CENPFP49454 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC20.43■□□□□ 0.86
CENPFP49454 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
CENPFP49454 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC20.43■□□□□ 0.86
CENPFP49454 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CENPFP49454 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms