Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.73■□□□□ 0.27
SLC9A3P48764 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC16.73■□□□□ 0.27
SLC9A3P48764 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.73■□□□□ 0.27
SLC9A3P48764 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
SLC9A3P48764 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SLC9A3P48764 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC9A3P48764 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
SLC9A3P48764 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SLC9A3P48764 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.73■□□□□ 0.27
SLC9A3P48764 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC9A3P48764 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SLC9A3P48764 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SLC9A3P48764 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.73■□□□□ 0.27
SLC9A3P48764 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
SLC9A3P48764 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC9A3P48764 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SLC9A3P48764 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.72■□□□□ 0.27
SLC9A3P48764 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.72■□□□□ 0.27
SLC9A3P48764 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SLC9A3P48764 AC009053.2-201ENST00000563701 2365 ntBASIC16.72■□□□□ 0.27
SLC9A3P48764 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
SLC9A3P48764 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC9A3P48764 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SLC9A3P48764 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC9A3P48764 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SLC9A3P48764 AC134043.2-201ENST00000624206 2238 ntBASIC16.72■□□□□ 0.27
SLC9A3P48764 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SLC9A3P48764 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
SLC9A3P48764 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
SLC9A3P48764 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SLC9A3P48764 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC9A3P48764 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.72■□□□□ 0.27
SLC9A3P48764 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC9A3P48764 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC9A3P48764 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC9A3P48764 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.72■□□□□ 0.27
SLC9A3P48764 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC9A3P48764 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC9A3P48764 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.72■□□□□ 0.27
SLC9A3P48764 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.72■□□□□ 0.27
SLC9A3P48764 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.72■□□□□ 0.27
SLC9A3P48764 AC233702.5-201ENST00000584107 538 ntBASIC16.72■□□□□ 0.27
SLC9A3P48764 DECR2-212ENST00000627716 352 ntTSL 2 BASIC16.72■□□□□ 0.27
SLC9A3P48764 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC9A3P48764 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC9A3P48764 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC9A3P48764 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.72■□□□□ 0.27
SLC9A3P48764 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC9A3P48764 AC099343.3-201ENST00000605834 2503 ntBASIC16.72■□□□□ 0.27
SLC9A3P48764 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
SLC9A3P48764 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SLC9A3P48764 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
SLC9A3P48764 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC9A3P48764 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC9A3P48764 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SLC9A3P48764 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SLC9A3P48764 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SLC9A3P48764 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC9A3P48764 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
SLC9A3P48764 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SLC9A3P48764 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC9A3P48764 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SLC9A3P48764 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.71■□□□□ 0.27
SLC9A3P48764 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.71■□□□□ 0.27
SLC9A3P48764 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC9A3P48764 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SLC9A3P48764 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC9A3P48764 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SLC9A3P48764 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.71■□□□□ 0.27
SLC9A3P48764 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SLC9A3P48764 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.71■□□□□ 0.27
SLC9A3P48764 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.71■□□□□ 0.27
SLC9A3P48764 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SLC9A3P48764 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SLC9A3P48764 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
SLC9A3P48764 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC9A3P48764 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SLC9A3P48764 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.71■□□□□ 0.27
SLC9A3P48764 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SLC9A3P48764 AL158047.1-201ENST00000445918 881 ntBASIC16.71■□□□□ 0.27
SLC9A3P48764 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC16.71■□□□□ 0.27
SLC9A3P48764 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SLC9A3P48764 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC16.71■□□□□ 0.27
SLC9A3P48764 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.71■□□□□ 0.27
SLC9A3P48764 MIR3180-5-201ENST00000583743 153 ntBASIC16.71■□□□□ 0.27
SLC9A3P48764 AC113410.3-201ENST00000623366 203 ntBASIC16.71■□□□□ 0.27
SLC9A3P48764 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC9A3P48764 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC9A3P48764 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC9A3P48764 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SLC9A3P48764 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.71■□□□□ 0.27
SLC9A3P48764 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC9A3P48764 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.71■□□□□ 0.27
SLC9A3P48764 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
SLC9A3P48764 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
SLC9A3P48764 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SLC9A3P48764 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC9A3P48764 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC9A3P48764 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.7■□□□□ 0.26
SLC9A3P48764 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms