Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PDE6BP35913 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC22.37■■□□□ 1.17
PDE6BP35913 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PDE6BP35913 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC22.37■■□□□ 1.17
PDE6BP35913 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC22.37■■□□□ 1.17
PDE6BP35913 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
PDE6BP35913 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PDE6BP35913 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
PDE6BP35913 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC22.37■■□□□ 1.17
PDE6BP35913 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
PDE6BP35913 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PDE6BP35913 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PDE6BP35913 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PDE6BP35913 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PDE6BP35913 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC22.37■■□□□ 1.17
PDE6BP35913 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC22.37■■□□□ 1.17
PDE6BP35913 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC22.37■■□□□ 1.17
PDE6BP35913 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC22.37■■□□□ 1.17
PDE6BP35913 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC22.37■■□□□ 1.17
PDE6BP35913 RPS15-207ENST00000591032 550 ntTSL 3 BASIC22.37■■□□□ 1.17
PDE6BP35913 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
PDE6BP35913 LINC01126-201ENST00000623515 1646 ntBASIC22.37■■□□□ 1.17
PDE6BP35913 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PDE6BP35913 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PDE6BP35913 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC22.37■■□□□ 1.17
PDE6BP35913 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PDE6BP35913 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PDE6BP35913 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC22.37■■□□□ 1.17
PDE6BP35913 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC22.37■■□□□ 1.17
PDE6BP35913 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PDE6BP35913 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
PDE6BP35913 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PDE6BP35913 ADK-206ENST00000541550 2222 ntTSL 2 BASIC22.37■■□□□ 1.17
PDE6BP35913 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
PDE6BP35913 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
PDE6BP35913 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PDE6BP35913 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC22.36■■□□□ 1.17
PDE6BP35913 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC22.36■■□□□ 1.17
PDE6BP35913 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
PDE6BP35913 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
PDE6BP35913 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
PDE6BP35913 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC22.36■■□□□ 1.17
PDE6BP35913 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PDE6BP35913 SNAI3-AS1-205ENST00000568633 2096 ntBASIC22.36■■□□□ 1.17
PDE6BP35913 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
PDE6BP35913 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
PDE6BP35913 SNCG-201ENST00000348795 684 ntTSL 2 BASIC22.36■■□□□ 1.17
PDE6BP35913 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
PDE6BP35913 AC211486.1-202ENST00000416371 468 ntBASIC22.36■■□□□ 1.17
PDE6BP35913 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC22.36■■□□□ 1.17
PDE6BP35913 AC211476.1-201ENST00000503899 468 ntBASIC22.36■■□□□ 1.17
PDE6BP35913 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC22.36■■□□□ 1.17
PDE6BP35913 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC22.36■■□□□ 1.17
PDE6BP35913 MIR1199-201ENST00000621445 119 ntBASIC22.36■■□□□ 1.17
PDE6BP35913 PGM5P2-202ENST00000637225 1043 ntBASIC22.36■■□□□ 1.17
PDE6BP35913 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
PDE6BP35913 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PDE6BP35913 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
PDE6BP35913 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC22.36■■□□□ 1.17
PDE6BP35913 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
PDE6BP35913 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC22.35■■□□□ 1.17
PDE6BP35913 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
PDE6BP35913 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC22.35■■□□□ 1.17
PDE6BP35913 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PDE6BP35913 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
PDE6BP35913 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PDE6BP35913 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PDE6BP35913 LBH-203ENST00000404397 543 ntTSL 4 BASIC22.35■■□□□ 1.17
PDE6BP35913 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC22.35■■□□□ 1.17
PDE6BP35913 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC22.35■■□□□ 1.17
PDE6BP35913 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC22.35■■□□□ 1.17
PDE6BP35913 AL022326.1-202ENST00000641533 845 ntBASIC22.35■■□□□ 1.17
PDE6BP35913 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PDE6BP35913 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PDE6BP35913 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PDE6BP35913 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
PDE6BP35913 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC22.35■■□□□ 1.17
PDE6BP35913 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PDE6BP35913 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC22.35■■□□□ 1.17
PDE6BP35913 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PDE6BP35913 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PDE6BP35913 AC079776.2-201ENST00000641154 1609 ntBASIC22.35■■□□□ 1.17
PDE6BP35913 STX6-204ENST00000542060 4809 ntTSL 2 BASIC22.34■■□□□ 1.17
PDE6BP35913 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PDE6BP35913 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PDE6BP35913 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PDE6BP35913 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC22.34■■□□□ 1.17
PDE6BP35913 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PDE6BP35913 ME2-218ENST00000640965 2476 ntTSL 5 BASIC22.34■■□□□ 1.17
PDE6BP35913 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
PDE6BP35913 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PDE6BP35913 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
PDE6BP35913 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
PDE6BP35913 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC22.34■■□□□ 1.17
PDE6BP35913 AP006288.1-201ENST00000446065 395 ntBASIC22.34■■□□□ 1.17
PDE6BP35913 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC22.34■■□□□ 1.17
PDE6BP35913 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC22.34■■□□□ 1.17
PDE6BP35913 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC22.34■■□□□ 1.17
PDE6BP35913 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC22.34■■□□□ 1.17
PDE6BP35913 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC22.34■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms