Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
COPB2P35606 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
COPB2P35606 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
COPB2P35606 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
COPB2P35606 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
COPB2P35606 MED22-202ENST00000371999 987 ntTSL 3 BASIC20.78■□□□□ 0.92
COPB2P35606 AL590627.1-203ENST00000421194 1026 ntBASIC20.78■□□□□ 0.92
COPB2P35606 KRT18P65-201ENST00000439811 1286 ntBASIC20.78■□□□□ 0.92
COPB2P35606 MTCL1P1-201ENST00000446207 792 ntBASIC20.78■□□□□ 0.92
COPB2P35606 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COPB2P35606 AC132008.2-207ENST00000454517 770 ntBASIC20.78■□□□□ 0.92
COPB2P35606 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC20.78■□□□□ 0.92
COPB2P35606 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
COPB2P35606 AC120114.3-201ENST00000611923 658 ntBASIC20.78■□□□□ 0.92
COPB2P35606 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COPB2P35606 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
COPB2P35606 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
COPB2P35606 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COPB2P35606 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COPB2P35606 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COPB2P35606 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
COPB2P35606 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
COPB2P35606 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
COPB2P35606 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
COPB2P35606 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
COPB2P35606 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
COPB2P35606 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
COPB2P35606 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
COPB2P35606 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COPB2P35606 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
COPB2P35606 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
COPB2P35606 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COPB2P35606 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC20.77■□□□□ 0.92
COPB2P35606 RCN1P2-201ENST00000398357 915 ntBASIC20.77■□□□□ 0.92
COPB2P35606 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
COPB2P35606 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC20.77■□□□□ 0.92
COPB2P35606 GZMM-202ENST00000592501 941 ntTSL 3 BASIC20.77■□□□□ 0.92
COPB2P35606 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC20.77■□□□□ 0.92
COPB2P35606 AL355877.3-201ENST00000622820 899 ntBASIC20.77■□□□□ 0.92
COPB2P35606 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.77■□□□□ 0.92
COPB2P35606 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COPB2P35606 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.77■□□□□ 0.92
COPB2P35606 AC004408.2-201ENST00000623613 2777 ntBASIC20.77■□□□□ 0.92
COPB2P35606 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.77■□□□□ 0.92
COPB2P35606 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
COPB2P35606 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
COPB2P35606 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.77■□□□□ 0.91
COPB2P35606 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
COPB2P35606 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC20.77■□□□□ 0.91
COPB2P35606 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
COPB2P35606 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC20.76■□□□□ 0.91
COPB2P35606 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
COPB2P35606 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.76■□□□□ 0.91
COPB2P35606 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
COPB2P35606 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC20.76■□□□□ 0.91
COPB2P35606 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC20.76■□□□□ 0.91
COPB2P35606 MEG3-211ENST00000452514 461 ntTSL 3 BASIC20.76■□□□□ 0.91
COPB2P35606 AC093909.1-201ENST00000504731 1122 ntBASIC20.76■□□□□ 0.91
COPB2P35606 RNA5SP419-201ENST00000515908 135 ntBASIC20.76■□□□□ 0.91
COPB2P35606 MOK-208ENST00000519058 917 ntTSL 2 BASIC20.76■□□□□ 0.91
COPB2P35606 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC20.76■□□□□ 0.91
COPB2P35606 AL138831.2-201ENST00000606564 490 ntBASIC20.76■□□□□ 0.91
COPB2P35606 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
COPB2P35606 AC023511.2-201ENST00000618803 211 ntBASIC20.76■□□□□ 0.91
COPB2P35606 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC20.76■□□□□ 0.91
COPB2P35606 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.76■□□□□ 0.91
COPB2P35606 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.76■□□□□ 0.91
COPB2P35606 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.76■□□□□ 0.91
COPB2P35606 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
COPB2P35606 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
COPB2P35606 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
COPB2P35606 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
COPB2P35606 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
COPB2P35606 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
COPB2P35606 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC20.75■□□□□ 0.91
COPB2P35606 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COPB2P35606 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
COPB2P35606 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COPB2P35606 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
COPB2P35606 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COPB2P35606 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.75■□□□□ 0.91
COPB2P35606 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COPB2P35606 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.75■□□□□ 0.91
COPB2P35606 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
COPB2P35606 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC20.75■□□□□ 0.91
COPB2P35606 AL031284.1-201ENST00000419297 478 ntBASIC20.75■□□□□ 0.91
COPB2P35606 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
COPB2P35606 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC20.75■□□□□ 0.91
COPB2P35606 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC20.75■□□□□ 0.91
COPB2P35606 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
COPB2P35606 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC20.75■□□□□ 0.91
COPB2P35606 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
COPB2P35606 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC20.75■□□□□ 0.91
COPB2P35606 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COPB2P35606 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COPB2P35606 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.75■□□□□ 0.91
COPB2P35606 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
COPB2P35606 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.75■□□□□ 0.91
COPB2P35606 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COPB2P35606 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms