Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CKS2P33552 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CKS2P33552 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
CKS2P33552 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC13.42□□□□□ -0.26
CKS2P33552 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
CKS2P33552 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
CKS2P33552 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC13.42□□□□□ -0.26
CKS2P33552 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CKS2P33552 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
CKS2P33552 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC13.42□□□□□ -0.26
CKS2P33552 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CKS2P33552 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CKS2P33552 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CKS2P33552 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC13.42□□□□□ -0.26
CKS2P33552 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
CKS2P33552 AL357033.4-201ENST00000617703 1807 ntBASIC13.42□□□□□ -0.26
CKS2P33552 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CKS2P33552 F11R-206ENST00000621309 4770 ntTSL 5 BASIC13.42□□□□□ -0.26
CKS2P33552 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CKS2P33552 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CKS2P33552 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CKS2P33552 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
CKS2P33552 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CKS2P33552 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CKS2P33552 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC13.42□□□□□ -0.26
CKS2P33552 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC13.42□□□□□ -0.26
CKS2P33552 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CKS2P33552 AC016769.1-201ENST00000409132 1010 ntBASIC13.42□□□□□ -0.26
CKS2P33552 AC007322.1-201ENST00000426983 750 ntBASIC13.42□□□□□ -0.26
CKS2P33552 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CKS2P33552 APTR-203ENST00000430801 583 ntTSL 5 BASIC13.42□□□□□ -0.26
CKS2P33552 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC13.42□□□□□ -0.26
CKS2P33552 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC13.42□□□□□ -0.26
CKS2P33552 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CKS2P33552 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC13.42□□□□□ -0.26
CKS2P33552 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC13.42□□□□□ -0.26
CKS2P33552 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CKS2P33552 AL160286.2-201ENST00000567150 934 ntBASIC13.42□□□□□ -0.26
CKS2P33552 AC231657.2-201ENST00000624556 255 ntBASIC13.42□□□□□ -0.26
CKS2P33552 WWOX-218ENST00000627394 894 ntTSL 5 BASIC13.42□□□□□ -0.26
CKS2P33552 HLA-DQB1-201ENST00000374943 1656 ntBASIC13.42□□□□□ -0.26
CKS2P33552 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC13.42□□□□□ -0.26
CKS2P33552 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CKS2P33552 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CKS2P33552 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CKS2P33552 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CKS2P33552 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CKS2P33552 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CKS2P33552 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CKS2P33552 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CKS2P33552 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
CKS2P33552 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
CKS2P33552 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
CKS2P33552 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
CKS2P33552 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC13.41□□□□□ -0.26
CKS2P33552 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CKS2P33552 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CKS2P33552 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
CKS2P33552 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CKS2P33552 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CKS2P33552 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
CKS2P33552 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC13.41□□□□□ -0.26
CKS2P33552 AC022211.2-201ENST00000585075 2527 ntBASIC13.41□□□□□ -0.26
CKS2P33552 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
CKS2P33552 HARS-201ENST00000307633 1780 ntTSL 2 BASIC13.41□□□□□ -0.26
CKS2P33552 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
CKS2P33552 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CKS2P33552 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC13.41□□□□□ -0.26
CKS2P33552 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CKS2P33552 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CKS2P33552 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CKS2P33552 HSCB-202ENST00000398941 955 ntTSL 2 BASIC13.41□□□□□ -0.26
CKS2P33552 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
CKS2P33552 SERPINH1P1-201ENST00000419794 1249 ntBASIC13.41□□□□□ -0.26
CKS2P33552 AC093787.1-201ENST00000450396 207 ntBASIC13.41□□□□□ -0.26
CKS2P33552 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CKS2P33552 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC13.41□□□□□ -0.26
CKS2P33552 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CKS2P33552 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC13.41□□□□□ -0.26
CKS2P33552 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC13.41□□□□□ -0.26
CKS2P33552 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC13.41□□□□□ -0.26
CKS2P33552 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC13.41□□□□□ -0.26
CKS2P33552 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC13.41□□□□□ -0.26
CKS2P33552 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CKS2P33552 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CKS2P33552 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CKS2P33552 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CKS2P33552 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CKS2P33552 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CKS2P33552 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CKS2P33552 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CKS2P33552 AL096828.2-201ENST00000567259 1965 ntBASIC13.41□□□□□ -0.26
CKS2P33552 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CKS2P33552 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
CKS2P33552 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
CKS2P33552 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CKS2P33552 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CKS2P33552 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC13.41□□□□□ -0.26
CKS2P33552 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
CKS2P33552 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms