Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHRNA3P32297 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.22■□□□□ 0.67
CHRNA3P32297 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHRNA3P32297 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHRNA3P32297 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.22■□□□□ 0.67
CHRNA3P32297 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHRNA3P32297 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHRNA3P32297 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHRNA3P32297 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHRNA3P32297 AC104076.2-201ENST00000448912 469 ntBASIC19.22■□□□□ 0.67
CHRNA3P32297 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHRNA3P32297 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.22■□□□□ 0.67
CHRNA3P32297 AL049597.2-201ENST00000565575 961 ntBASIC19.22■□□□□ 0.67
CHRNA3P32297 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.22■□□□□ 0.67
CHRNA3P32297 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHRNA3P32297 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.22■□□□□ 0.67
CHRNA3P32297 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CHRNA3P32297 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHRNA3P32297 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CHRNA3P32297 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.22■□□□□ 0.67
CHRNA3P32297 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHRNA3P32297 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHRNA3P32297 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHRNA3P32297 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.22■□□□□ 0.67
CHRNA3P32297 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.21■□□□□ 0.67
CHRNA3P32297 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.21■□□□□ 0.67
CHRNA3P32297 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.21■□□□□ 0.67
CHRNA3P32297 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHRNA3P32297 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CHRNA3P32297 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
CHRNA3P32297 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHRNA3P32297 AL109659.2-201ENST00000606809 1674 ntBASIC19.21■□□□□ 0.67
CHRNA3P32297 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHRNA3P32297 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHRNA3P32297 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHRNA3P32297 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHRNA3P32297 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.21■□□□□ 0.67
CHRNA3P32297 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.21■□□□□ 0.67
CHRNA3P32297 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.21■□□□□ 0.67
CHRNA3P32297 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHRNA3P32297 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.21■□□□□ 0.67
CHRNA3P32297 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CHRNA3P32297 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHRNA3P32297 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHRNA3P32297 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHRNA3P32297 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHRNA3P32297 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CHRNA3P32297 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHRNA3P32297 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CHRNA3P32297 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHRNA3P32297 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHRNA3P32297 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHRNA3P32297 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHRNA3P32297 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.2■□□□□ 0.66
CHRNA3P32297 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CHRNA3P32297 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.2■□□□□ 0.66
CHRNA3P32297 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CHRNA3P32297 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.2■□□□□ 0.66
CHRNA3P32297 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHRNA3P32297 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.2■□□□□ 0.66
CHRNA3P32297 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
CHRNA3P32297 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.2■□□□□ 0.66
CHRNA3P32297 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.2■□□□□ 0.66
CHRNA3P32297 BX664615.1-201ENST00000443558 458 ntBASIC19.2■□□□□ 0.66
CHRNA3P32297 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHRNA3P32297 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.2■□□□□ 0.66
CHRNA3P32297 AL138966.2-201ENST00000621997 464 ntBASIC19.2■□□□□ 0.66
CHRNA3P32297 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CHRNA3P32297 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.2■□□□□ 0.66
CHRNA3P32297 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHRNA3P32297 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHRNA3P32297 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
CHRNA3P32297 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHRNA3P32297 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHRNA3P32297 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHRNA3P32297 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.2■□□□□ 0.66
CHRNA3P32297 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHRNA3P32297 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CHRNA3P32297 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHRNA3P32297 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CHRNA3P32297 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHRNA3P32297 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHRNA3P32297 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHRNA3P32297 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHRNA3P32297 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.19■□□□□ 0.66
CHRNA3P32297 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.19■□□□□ 0.66
CHRNA3P32297 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.19■□□□□ 0.66
CHRNA3P32297 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.19■□□□□ 0.66
CHRNA3P32297 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.19■□□□□ 0.66
CHRNA3P32297 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
CHRNA3P32297 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHRNA3P32297 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHRNA3P32297 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHRNA3P32297 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.19■□□□□ 0.66
CHRNA3P32297 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHRNA3P32297 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHRNA3P32297 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CHRNA3P32297 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHRNA3P32297 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHRNA3P32297 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms