Protein–RNA interactions for Protein: P27695

APEX1, DNA-(apurinic or apyrimidinic site) lyase, humanhuman

Known RBP Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1P27695 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.48■□□□□ 0.23
APEX1P27695 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
APEX1P27695 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
APEX1P27695 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.48■□□□□ 0.23
APEX1P27695 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.48■□□□□ 0.23
APEX1P27695 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
APEX1P27695 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
APEX1P27695 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
APEX1P27695 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
APEX1P27695 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.48■□□□□ 0.23
APEX1P27695 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
APEX1P27695 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
APEX1P27695 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.48■□□□□ 0.23
APEX1P27695 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.48■□□□□ 0.23
APEX1P27695 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.48■□□□□ 0.23
APEX1P27695 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
APEX1P27695 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.48■□□□□ 0.23
APEX1P27695 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
APEX1P27695 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.48■□□□□ 0.23
APEX1P27695 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
APEX1P27695 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.48■□□□□ 0.23
APEX1P27695 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.48■□□□□ 0.23
APEX1P27695 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
APEX1P27695 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.48■□□□□ 0.23
APEX1P27695 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
APEX1P27695 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
APEX1P27695 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
APEX1P27695 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.47■□□□□ 0.23
APEX1P27695 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
APEX1P27695 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.47■□□□□ 0.23
APEX1P27695 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
APEX1P27695 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.47■□□□□ 0.23
APEX1P27695 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.47■□□□□ 0.23
APEX1P27695 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
APEX1P27695 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
APEX1P27695 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
APEX1P27695 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
APEX1P27695 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
APEX1P27695 AC012317.2-201ENST00000623305 2251 ntBASIC16.47■□□□□ 0.23
APEX1P27695 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
APEX1P27695 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
APEX1P27695 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
APEX1P27695 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
APEX1P27695 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
APEX1P27695 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
APEX1P27695 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
APEX1P27695 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
APEX1P27695 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
APEX1P27695 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
APEX1P27695 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.47■□□□□ 0.23
APEX1P27695 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.47■□□□□ 0.23
APEX1P27695 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.47■□□□□ 0.23
APEX1P27695 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
APEX1P27695 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.47■□□□□ 0.23
APEX1P27695 AP005242.2-201ENST00000580065 1175 ntBASIC16.47■□□□□ 0.23
APEX1P27695 AC097493.4-201ENST00000641197 219 ntBASIC16.47■□□□□ 0.23
APEX1P27695 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
APEX1P27695 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
APEX1P27695 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
APEX1P27695 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
APEX1P27695 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
APEX1P27695 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
APEX1P27695 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
APEX1P27695 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
APEX1P27695 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
APEX1P27695 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
APEX1P27695 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
APEX1P27695 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
APEX1P27695 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
APEX1P27695 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
APEX1P27695 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
APEX1P27695 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
APEX1P27695 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.47■□□□□ 0.23
APEX1P27695 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.47■□□□□ 0.23
APEX1P27695 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.47■□□□□ 0.23
APEX1P27695 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.47■□□□□ 0.23
APEX1P27695 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
APEX1P27695 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
APEX1P27695 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.46■□□□□ 0.23
APEX1P27695 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
APEX1P27695 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
APEX1P27695 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
APEX1P27695 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.46■□□□□ 0.23
APEX1P27695 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
APEX1P27695 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
APEX1P27695 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
APEX1P27695 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
APEX1P27695 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.46■□□□□ 0.23
APEX1P27695 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
APEX1P27695 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.46■□□□□ 0.23
APEX1P27695 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
APEX1P27695 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
APEX1P27695 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.46■□□□□ 0.23
APEX1P27695 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.46■□□□□ 0.23
APEX1P27695 FITM1-202ENST00000559294 800 ntBASIC16.46■□□□□ 0.23
APEX1P27695 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
APEX1P27695 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
APEX1P27695 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
APEX1P27695 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
APEX1P27695 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms