Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.31■□□□□ 0.36
MMP11P24347 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.31■□□□□ 0.36
MMP11P24347 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
MMP11P24347 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MMP11P24347 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.31■□□□□ 0.36
MMP11P24347 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MMP11P24347 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.3■□□□□ 0.36
MMP11P24347 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MMP11P24347 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MMP11P24347 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MMP11P24347 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.3■□□□□ 0.36
MMP11P24347 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
MMP11P24347 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MMP11P24347 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MMP11P24347 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
MMP11P24347 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.3■□□□□ 0.36
MMP11P24347 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MMP11P24347 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MMP11P24347 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MMP11P24347 DUSP5P1-201ENST00000441325 1139 ntBASIC17.3■□□□□ 0.36
MMP11P24347 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.3■□□□□ 0.36
MMP11P24347 AC092119.3-201ENST00000612618 583 ntBASIC17.3■□□□□ 0.36
MMP11P24347 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.3■□□□□ 0.36
MMP11P24347 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
MMP11P24347 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MMP11P24347 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.3■□□□□ 0.36
MMP11P24347 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MMP11P24347 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MMP11P24347 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.3■□□□□ 0.36
MMP11P24347 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.3■□□□□ 0.36
MMP11P24347 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MMP11P24347 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
MMP11P24347 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
MMP11P24347 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MMP11P24347 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MMP11P24347 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MMP11P24347 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MMP11P24347 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MMP11P24347 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MMP11P24347 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MMP11P24347 AL357033.4-201ENST00000617703 1807 ntBASIC17.29■□□□□ 0.36
MMP11P24347 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MMP11P24347 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MMP11P24347 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MMP11P24347 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
MMP11P24347 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.29■□□□□ 0.36
MMP11P24347 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.29■□□□□ 0.36
MMP11P24347 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.29■□□□□ 0.36
MMP11P24347 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.29■□□□□ 0.36
MMP11P24347 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.29■□□□□ 0.36
MMP11P24347 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.29■□□□□ 0.36
MMP11P24347 AC092329.2-201ENST00000598402 547 ntBASIC17.29■□□□□ 0.36
MMP11P24347 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MMP11P24347 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.29■□□□□ 0.36
MMP11P24347 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.29■□□□□ 0.36
MMP11P24347 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MMP11P24347 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MMP11P24347 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.29■□□□□ 0.36
MMP11P24347 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.29■□□□□ 0.36
MMP11P24347 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MMP11P24347 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MMP11P24347 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MMP11P24347 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
MMP11P24347 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
MMP11P24347 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.28■□□□□ 0.36
MMP11P24347 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MMP11P24347 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MMP11P24347 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.28■□□□□ 0.36
MMP11P24347 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.28■□□□□ 0.36
MMP11P24347 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.28■□□□□ 0.36
MMP11P24347 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MMP11P24347 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
MMP11P24347 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.28■□□□□ 0.36
MMP11P24347 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
MMP11P24347 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.28■□□□□ 0.36
MMP11P24347 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MMP11P24347 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.28■□□□□ 0.36
MMP11P24347 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
MMP11P24347 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MMP11P24347 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MMP11P24347 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MMP11P24347 TSPY22P-201ENST00000427496 604 ntBASIC17.28■□□□□ 0.36
MMP11P24347 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.28■□□□□ 0.36
MMP11P24347 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MMP11P24347 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.28■□□□□ 0.36
MMP11P24347 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MMP11P24347 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.28■□□□□ 0.36
MMP11P24347 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MMP11P24347 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.28■□□□□ 0.36
MMP11P24347 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.28■□□□□ 0.36
MMP11P24347 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MMP11P24347 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MMP11P24347 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MMP11P24347 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MMP11P24347 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
MMP11P24347 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
MMP11P24347 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
MMP11P24347 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MMP11P24347 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MMP11P24347 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms