Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RFX1P22670 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.83■□□□□ 0.77
RFX1P22670 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RFX1P22670 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RFX1P22670 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
RFX1P22670 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RFX1P22670 AC007613.1-201ENST00000572811 2597 ntBASIC19.83■□□□□ 0.77
RFX1P22670 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RFX1P22670 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RFX1P22670 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RFX1P22670 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RFX1P22670 AC112907.2-201ENST00000448639 330 ntBASIC19.83■□□□□ 0.77
RFX1P22670 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC19.83■□□□□ 0.77
RFX1P22670 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.83■□□□□ 0.77
RFX1P22670 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19.83■□□□□ 0.77
RFX1P22670 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.83■□□□□ 0.77
RFX1P22670 PRELID1P1-202ENST00000567272 903 ntBASIC19.83■□□□□ 0.77
RFX1P22670 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
RFX1P22670 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RFX1P22670 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RFX1P22670 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RFX1P22670 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RFX1P22670 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RFX1P22670 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.83■□□□□ 0.76
RFX1P22670 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RFX1P22670 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.76
RFX1P22670 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RFX1P22670 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
RFX1P22670 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RFX1P22670 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.83■□□□□ 0.76
RFX1P22670 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RFX1P22670 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.83■□□□□ 0.76
RFX1P22670 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
RFX1P22670 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RFX1P22670 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RFX1P22670 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
RFX1P22670 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RFX1P22670 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RFX1P22670 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.82■□□□□ 0.76
RFX1P22670 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.82■□□□□ 0.76
RFX1P22670 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
RFX1P22670 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RFX1P22670 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
RFX1P22670 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RFX1P22670 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RFX1P22670 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RFX1P22670 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.82■□□□□ 0.76
RFX1P22670 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RFX1P22670 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RFX1P22670 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RFX1P22670 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RFX1P22670 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.82■□□□□ 0.76
RFX1P22670 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.82■□□□□ 0.76
RFX1P22670 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.82■□□□□ 0.76
RFX1P22670 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.82■□□□□ 0.76
RFX1P22670 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.82■□□□□ 0.76
RFX1P22670 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.82■□□□□ 0.76
RFX1P22670 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.82■□□□□ 0.76
RFX1P22670 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RFX1P22670 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RFX1P22670 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RFX1P22670 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.82■□□□□ 0.76
RFX1P22670 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
RFX1P22670 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.82■□□□□ 0.76
RFX1P22670 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.82■□□□□ 0.76
RFX1P22670 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RFX1P22670 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
RFX1P22670 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.81■□□□□ 0.76
RFX1P22670 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RFX1P22670 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC19.81■□□□□ 0.76
RFX1P22670 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RFX1P22670 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.81■□□□□ 0.76
RFX1P22670 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RFX1P22670 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RFX1P22670 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RFX1P22670 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.81■□□□□ 0.76
RFX1P22670 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RFX1P22670 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RFX1P22670 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RFX1P22670 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RFX1P22670 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
RFX1P22670 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RFX1P22670 SLC25A6P5-201ENST00000435663 894 ntBASIC19.81■□□□□ 0.76
RFX1P22670 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RFX1P22670 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RFX1P22670 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RFX1P22670 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RFX1P22670 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.81■□□□□ 0.76
RFX1P22670 ZNF444P1-201ENST00000559497 298 ntBASIC19.81■□□□□ 0.76
RFX1P22670 AL136038.3-201ENST00000561909 1096 ntBASIC19.81■□□□□ 0.76
RFX1P22670 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.81■□□□□ 0.76
RFX1P22670 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
RFX1P22670 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
RFX1P22670 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RFX1P22670 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
RFX1P22670 SDHAP2-201ENST00000455183 2001 ntBASIC19.81■□□□□ 0.76
RFX1P22670 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RFX1P22670 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RFX1P22670 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
RFX1P22670 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms