Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NFKB1P19838 NOC2LP2-201ENST00000407594 1944 ntBASIC18.55■□□□□ 0.56
NFKB1P19838 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
NFKB1P19838 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NFKB1P19838 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.55■□□□□ 0.56
NFKB1P19838 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NFKB1P19838 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.55■□□□□ 0.56
NFKB1P19838 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.55■□□□□ 0.56
NFKB1P19838 LINC01023-201ENST00000606054 436 ntBASIC18.55■□□□□ 0.56
NFKB1P19838 AC139887.4-201ENST00000607877 719 ntBASIC18.55■□□□□ 0.56
NFKB1P19838 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
NFKB1P19838 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NFKB1P19838 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.55■□□□□ 0.56
NFKB1P19838 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
NFKB1P19838 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NFKB1P19838 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.55■□□□□ 0.56
NFKB1P19838 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NFKB1P19838 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.55■□□□□ 0.56
NFKB1P19838 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
NFKB1P19838 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.55■□□□□ 0.56
NFKB1P19838 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
NFKB1P19838 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NFKB1P19838 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
NFKB1P19838 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NFKB1P19838 AC093010.1-201ENST00000473625 1624 ntBASIC18.54■□□□□ 0.56
NFKB1P19838 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NFKB1P19838 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NFKB1P19838 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
NFKB1P19838 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.54■□□□□ 0.56
NFKB1P19838 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.54■□□□□ 0.56
NFKB1P19838 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.54■□□□□ 0.56
NFKB1P19838 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NFKB1P19838 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NFKB1P19838 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
NFKB1P19838 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
NFKB1P19838 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NFKB1P19838 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NFKB1P19838 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NFKB1P19838 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NFKB1P19838 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NFKB1P19838 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NFKB1P19838 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NFKB1P19838 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.54■□□□□ 0.56
NFKB1P19838 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
NFKB1P19838 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NFKB1P19838 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NFKB1P19838 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NFKB1P19838 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NFKB1P19838 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NFKB1P19838 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NFKB1P19838 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
NFKB1P19838 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NFKB1P19838 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
NFKB1P19838 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
NFKB1P19838 PVRIG2P-201ENST00000435460 978 ntBASIC18.53■□□□□ 0.56
NFKB1P19838 BX664615.1-201ENST00000443558 458 ntBASIC18.53■□□□□ 0.56
NFKB1P19838 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.53■□□□□ 0.56
NFKB1P19838 YBX1P2-201ENST00000489612 999 ntBASIC18.53■□□□□ 0.56
NFKB1P19838 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
NFKB1P19838 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.53■□□□□ 0.56
NFKB1P19838 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
NFKB1P19838 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
NFKB1P19838 AC011558.1-201ENST00000623459 338 ntBASIC18.53■□□□□ 0.56
NFKB1P19838 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NFKB1P19838 AC068880.1-201ENST00000507289 2297 ntBASIC18.53■□□□□ 0.56
NFKB1P19838 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.53■□□□□ 0.56
NFKB1P19838 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
NFKB1P19838 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NFKB1P19838 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
NFKB1P19838 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NFKB1P19838 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.53■□□□□ 0.56
NFKB1P19838 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NFKB1P19838 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
NFKB1P19838 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NFKB1P19838 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
NFKB1P19838 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NFKB1P19838 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
NFKB1P19838 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NFKB1P19838 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.52■□□□□ 0.56
NFKB1P19838 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
NFKB1P19838 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
NFKB1P19838 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NFKB1P19838 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.52■□□□□ 0.56
NFKB1P19838 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NFKB1P19838 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NFKB1P19838 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
NFKB1P19838 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
NFKB1P19838 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
NFKB1P19838 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NFKB1P19838 AC117947.1-201ENST00000427448 529 ntBASIC18.52■□□□□ 0.56
NFKB1P19838 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
NFKB1P19838 RASA4DP-201ENST00000460726 1199 ntBASIC18.52■□□□□ 0.56
NFKB1P19838 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.52■□□□□ 0.56
NFKB1P19838 AC034232.1-201ENST00000506026 1064 ntBASIC18.52■□□□□ 0.56
NFKB1P19838 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NFKB1P19838 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.52■□□□□ 0.56
NFKB1P19838 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
NFKB1P19838 AL031432.5-201ENST00000641059 760 ntBASIC18.52■□□□□ 0.56
NFKB1P19838 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
NFKB1P19838 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms