Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NCLP19338 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC21.68■■□□□ 1.06
NCLP19338 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC21.68■■□□□ 1.06
NCLP19338 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NCLP19338 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NCLP19338 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NCLP19338 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
NCLP19338 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NCLP19338 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NCLP19338 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NCLP19338 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
NCLP19338 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NCLP19338 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
NCLP19338 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC21.67■■□□□ 1.06
NCLP19338 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NCLP19338 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC21.67■■□□□ 1.06
NCLP19338 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NCLP19338 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NCLP19338 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NCLP19338 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
NCLP19338 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NCLP19338 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NCLP19338 MTMR9LP-203ENST00000426597 1545 ntBASIC21.67■■□□□ 1.06
NCLP19338 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NCLP19338 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NCLP19338 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
NCLP19338 KRT16P5-201ENST00000455284 522 ntBASIC21.67■■□□□ 1.06
NCLP19338 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
NCLP19338 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NCLP19338 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC21.67■■□□□ 1.06
NCLP19338 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NCLP19338 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NCLP19338 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
NCLP19338 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
NCLP19338 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NCLP19338 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
NCLP19338 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
NCLP19338 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NCLP19338 NFYC-AS1-201ENST00000606277 1687 ntBASIC21.66■■□□□ 1.06
NCLP19338 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC21.66■■□□□ 1.06
NCLP19338 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NCLP19338 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
NCLP19338 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
NCLP19338 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
NCLP19338 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
NCLP19338 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
NCLP19338 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC21.66■■□□□ 1.06
NCLP19338 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NCLP19338 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NCLP19338 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NCLP19338 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC21.66■■□□□ 1.06
NCLP19338 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NCLP19338 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC21.66■■□□□ 1.06
NCLP19338 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC21.66■■□□□ 1.06
NCLP19338 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
NCLP19338 AC113410.3-201ENST00000623366 203 ntBASIC21.66■■□□□ 1.06
NCLP19338 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
NCLP19338 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NCLP19338 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC21.66■■□□□ 1.06
NCLP19338 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NCLP19338 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
NCLP19338 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
NCLP19338 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NCLP19338 GNAS-203ENST00000306120 1878 ntBASIC21.66■■□□□ 1.06
NCLP19338 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC21.66■■□□□ 1.06
NCLP19338 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NCLP19338 FST-202ENST00000396947 2538 ntTSL 5 BASIC21.66■■□□□ 1.06
NCLP19338 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC21.66■■□□□ 1.06
NCLP19338 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
NCLP19338 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC21.66■■□□□ 1.06
NCLP19338 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NCLP19338 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
NCLP19338 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
NCLP19338 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NCLP19338 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NCLP19338 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC21.65■■□□□ 1.06
NCLP19338 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NCLP19338 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
NCLP19338 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
NCLP19338 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC21.65■■□□□ 1.06
NCLP19338 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC21.65■■□□□ 1.06
NCLP19338 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC21.65■■□□□ 1.06
NCLP19338 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NCLP19338 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NCLP19338 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
NCLP19338 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NCLP19338 TSPY7P-201ENST00000431358 1114 ntBASIC21.65■■□□□ 1.06
NCLP19338 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC21.65■■□□□ 1.06
NCLP19338 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC21.65■■□□□ 1.06
NCLP19338 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NCLP19338 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
NCLP19338 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
NCLP19338 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NCLP19338 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
NCLP19338 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NCLP19338 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC21.65■■□□□ 1.06
NCLP19338 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
NCLP19338 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
NCLP19338 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC21.65■■□□□ 1.06
NCLP19338 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms