Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 MIR564-202ENST00000385049 94 ntBASIC18.19■□□□□ 0.5
XRCC1P18887 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
XRCC1P18887 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
XRCC1P18887 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.19■□□□□ 0.5
XRCC1P18887 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.19■□□□□ 0.5
XRCC1P18887 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.19■□□□□ 0.5
XRCC1P18887 AL671277.2-201ENST00000458060 996 ntBASIC18.19■□□□□ 0.5
XRCC1P18887 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.19■□□□□ 0.5
XRCC1P18887 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.19■□□□□ 0.5
XRCC1P18887 AC024243.1-201ENST00000609234 778 ntBASIC18.19■□□□□ 0.5
XRCC1P18887 AC068587.9-201ENST00000641814 219 ntBASIC18.19■□□□□ 0.5
XRCC1P18887 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
XRCC1P18887 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
XRCC1P18887 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
XRCC1P18887 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
XRCC1P18887 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
XRCC1P18887 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.19■□□□□ 0.5
XRCC1P18887 AC139713.2-201ENST00000641328 2723 ntBASIC18.19■□□□□ 0.5
XRCC1P18887 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
XRCC1P18887 AC012313.1-201ENST00000593393 3059 ntBASIC18.19■□□□□ 0.5
XRCC1P18887 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
XRCC1P18887 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
XRCC1P18887 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
XRCC1P18887 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
XRCC1P18887 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
XRCC1P18887 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.18■□□□□ 0.5
XRCC1P18887 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
XRCC1P18887 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
XRCC1P18887 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
XRCC1P18887 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.18■□□□□ 0.5
XRCC1P18887 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
XRCC1P18887 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
XRCC1P18887 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
XRCC1P18887 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.18■□□□□ 0.5
XRCC1P18887 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.18■□□□□ 0.5
XRCC1P18887 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.18■□□□□ 0.5
XRCC1P18887 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
XRCC1P18887 AC112907.2-201ENST00000448639 330 ntBASIC18.18■□□□□ 0.5
XRCC1P18887 AC034232.1-201ENST00000506026 1064 ntBASIC18.18■□□□□ 0.5
XRCC1P18887 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.18■□□□□ 0.5
XRCC1P18887 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.18■□□□□ 0.5
XRCC1P18887 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.18■□□□□ 0.5
XRCC1P18887 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
XRCC1P18887 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.18■□□□□ 0.5
XRCC1P18887 AL121956.5-201ENST00000625261 221 ntBASIC18.18■□□□□ 0.5
XRCC1P18887 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
XRCC1P18887 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.18■□□□□ 0.5
XRCC1P18887 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.18■□□□□ 0.5
XRCC1P18887 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
XRCC1P18887 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.18■□□□□ 0.5
XRCC1P18887 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
XRCC1P18887 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.18■□□□□ 0.5
XRCC1P18887 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
XRCC1P18887 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.18■□□□□ 0.5
XRCC1P18887 AC008764.6-201ENST00000595909 2069 ntBASIC18.18■□□□□ 0.5
XRCC1P18887 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
XRCC1P18887 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
XRCC1P18887 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
XRCC1P18887 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.17■□□□□ 0.5
XRCC1P18887 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
XRCC1P18887 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
XRCC1P18887 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
XRCC1P18887 HOXB1-202ENST00000577092 1414 ntBASIC18.17■□□□□ 0.5
XRCC1P18887 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.17■□□□□ 0.5
XRCC1P18887 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
XRCC1P18887 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.17■□□□□ 0.5
XRCC1P18887 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.17■□□□□ 0.5
XRCC1P18887 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.17■□□□□ 0.5
XRCC1P18887 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.17■□□□□ 0.5
XRCC1P18887 SEC1P-202ENST00000473944 940 ntBASIC18.17■□□□□ 0.5
XRCC1P18887 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
XRCC1P18887 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
XRCC1P18887 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
XRCC1P18887 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.17■□□□□ 0.5
XRCC1P18887 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
XRCC1P18887 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
XRCC1P18887 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.17■□□□□ 0.5
XRCC1P18887 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
XRCC1P18887 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
XRCC1P18887 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
XRCC1P18887 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
XRCC1P18887 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
XRCC1P18887 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.17■□□□□ 0.5
XRCC1P18887 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
XRCC1P18887 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
XRCC1P18887 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.16■□□□□ 0.5
XRCC1P18887 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.16■□□□□ 0.5
XRCC1P18887 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
XRCC1P18887 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
XRCC1P18887 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
XRCC1P18887 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.16■□□□□ 0.5
XRCC1P18887 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
XRCC1P18887 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.16■□□□□ 0.5
XRCC1P18887 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
XRCC1P18887 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
XRCC1P18887 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.16■□□□□ 0.5
XRCC1P18887 RASA4DP-201ENST00000460726 1199 ntBASIC18.16■□□□□ 0.5
XRCC1P18887 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.16■□□□□ 0.5
XRCC1P18887 AC091076.1-201ENST00000610741 619 ntBASIC18.16■□□□□ 0.5
XRCC1P18887 HYMAI.1-201ENST00000620949 238 ntBASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms