Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBL4AP11441 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
UBL4AP11441 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBL4AP11441 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
UBL4AP11441 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
UBL4AP11441 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBL4AP11441 ATP5G1P1-201ENST00000448724 379 ntBASIC16.87■□□□□ 0.29
UBL4AP11441 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBL4AP11441 MIR3180-4-201ENST00000582223 153 ntBASIC16.87■□□□□ 0.29
UBL4AP11441 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.87■□□□□ 0.29
UBL4AP11441 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.87■□□□□ 0.29
UBL4AP11441 AC024243.1-201ENST00000609234 778 ntBASIC16.87■□□□□ 0.29
UBL4AP11441 AC097493.4-201ENST00000641197 219 ntBASIC16.87■□□□□ 0.29
UBL4AP11441 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.87■□□□□ 0.29
UBL4AP11441 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBL4AP11441 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBL4AP11441 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
UBL4AP11441 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBL4AP11441 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.87■□□□□ 0.29
UBL4AP11441 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBL4AP11441 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
UBL4AP11441 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.86■□□□□ 0.29
UBL4AP11441 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
UBL4AP11441 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
UBL4AP11441 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
UBL4AP11441 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.86■□□□□ 0.29
UBL4AP11441 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.86■□□□□ 0.29
UBL4AP11441 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
UBL4AP11441 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.86■□□□□ 0.29
UBL4AP11441 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.86■□□□□ 0.29
UBL4AP11441 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.86■□□□□ 0.29
UBL4AP11441 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
UBL4AP11441 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.86■□□□□ 0.29
UBL4AP11441 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
UBL4AP11441 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.86■□□□□ 0.29
UBL4AP11441 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.86■□□□□ 0.29
UBL4AP11441 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
UBL4AP11441 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
UBL4AP11441 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.86■□□□□ 0.29
UBL4AP11441 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.86■□□□□ 0.29
UBL4AP11441 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.86■□□□□ 0.29
UBL4AP11441 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.86■□□□□ 0.29
UBL4AP11441 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.86■□□□□ 0.29
UBL4AP11441 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.86■□□□□ 0.29
UBL4AP11441 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.86■□□□□ 0.29
UBL4AP11441 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.86■□□□□ 0.29
UBL4AP11441 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.86■□□□□ 0.29
UBL4AP11441 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.86■□□□□ 0.29
UBL4AP11441 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
UBL4AP11441 AC010240.3-201ENST00000607688 395 ntBASIC16.86■□□□□ 0.29
UBL4AP11441 AC012306.2-201ENST00000609350 630 ntBASIC16.86■□□□□ 0.29
UBL4AP11441 AC005363.2-201ENST00000618631 242 ntBASIC16.86■□□□□ 0.29
UBL4AP11441 AC141257.4-201ENST00000634557 245 ntBASIC16.86■□□□□ 0.29
UBL4AP11441 AC136944.6-201ENST00000634818 245 ntBASIC16.86■□□□□ 0.29
UBL4AP11441 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
UBL4AP11441 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.86■□□□□ 0.29
UBL4AP11441 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
UBL4AP11441 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
UBL4AP11441 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
UBL4AP11441 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
UBL4AP11441 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.86■□□□□ 0.29
UBL4AP11441 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
UBL4AP11441 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
UBL4AP11441 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
UBL4AP11441 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.86■□□□□ 0.29
UBL4AP11441 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
UBL4AP11441 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
UBL4AP11441 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
UBL4AP11441 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
UBL4AP11441 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.85■□□□□ 0.29
UBL4AP11441 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
UBL4AP11441 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.85■□□□□ 0.29
UBL4AP11441 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
UBL4AP11441 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
UBL4AP11441 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
UBL4AP11441 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
UBL4AP11441 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
UBL4AP11441 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.85■□□□□ 0.29
UBL4AP11441 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.85■□□□□ 0.29
UBL4AP11441 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
UBL4AP11441 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
UBL4AP11441 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
UBL4AP11441 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
UBL4AP11441 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
UBL4AP11441 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
UBL4AP11441 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.85■□□□□ 0.29
UBL4AP11441 AC113347.1-201ENST00000413321 391 ntBASIC16.85■□□□□ 0.29
UBL4AP11441 SEC1P-202ENST00000473944 940 ntBASIC16.85■□□□□ 0.29
UBL4AP11441 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.85■□□□□ 0.29
UBL4AP11441 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.85■□□□□ 0.29
UBL4AP11441 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.85■□□□□ 0.29
UBL4AP11441 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.85■□□□□ 0.29
UBL4AP11441 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.85■□□□□ 0.29
UBL4AP11441 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.85■□□□□ 0.29
UBL4AP11441 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.85■□□□□ 0.29
UBL4AP11441 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
UBL4AP11441 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
UBL4AP11441 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
UBL4AP11441 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
UBL4AP11441 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms