Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC20.83■□□□□ 0.93
PTPRFP10586 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC20.83■□□□□ 0.93
PTPRFP10586 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC20.83■□□□□ 0.92
PTPRFP10586 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
PTPRFP10586 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PTPRFP10586 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PTPRFP10586 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC20.83■□□□□ 0.92
PTPRFP10586 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PTPRFP10586 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
PTPRFP10586 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC20.82■□□□□ 0.92
PTPRFP10586 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
PTPRFP10586 UNC93B6-202ENST00000528242 690 ntBASIC20.82■□□□□ 0.92
PTPRFP10586 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC20.82■□□□□ 0.92
PTPRFP10586 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
PTPRFP10586 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTPRFP10586 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTPRFP10586 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.82■□□□□ 0.92
PTPRFP10586 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTPRFP10586 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTPRFP10586 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTPRFP10586 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTPRFP10586 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PTPRFP10586 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.82■□□□□ 0.92
PTPRFP10586 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTPRFP10586 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTPRFP10586 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTPRFP10586 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTPRFP10586 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC20.82■□□□□ 0.92
PTPRFP10586 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PTPRFP10586 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
PTPRFP10586 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTPRFP10586 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
PTPRFP10586 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PTPRFP10586 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC20.81■□□□□ 0.92
PTPRFP10586 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
PTPRFP10586 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PTPRFP10586 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC20.81■□□□□ 0.92
PTPRFP10586 KRT18P3-201ENST00000451602 1288 ntBASIC20.81■□□□□ 0.92
PTPRFP10586 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PTPRFP10586 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC20.81■□□□□ 0.92
PTPRFP10586 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC20.81■□□□□ 0.92
PTPRFP10586 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC20.81■□□□□ 0.92
PTPRFP10586 SDCCAG3P1-201ENST00000589292 1150 ntBASIC20.81■□□□□ 0.92
PTPRFP10586 AL139424.1-201ENST00000607572 797 ntBASIC20.81■□□□□ 0.92
PTPRFP10586 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PTPRFP10586 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PTPRFP10586 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.8■□□□□ 0.92
PTPRFP10586 RPS2P28-201ENST00000314255 741 ntBASIC20.8■□□□□ 0.92
PTPRFP10586 CENPM-204ENST00000402420 688 ntTSL 5 BASIC20.8■□□□□ 0.92
PTPRFP10586 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.8■□□□□ 0.92
PTPRFP10586 DNAJB3-202ENST00000449667 1266 ntBASIC20.8■□□□□ 0.92
PTPRFP10586 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PTPRFP10586 COPE-211ENST00000600932 1144 ntTSL 5 BASIC20.8■□□□□ 0.92
PTPRFP10586 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PTPRFP10586 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTPRFP10586 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTPRFP10586 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.8■□□□□ 0.92
PTPRFP10586 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
PTPRFP10586 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTPRFP10586 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTPRFP10586 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTPRFP10586 PMPCAP1-201ENST00000508114 1576 ntBASIC20.8■□□□□ 0.92
PTPRFP10586 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
PTPRFP10586 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.8■□□□□ 0.92
PTPRFP10586 AC093010.1-201ENST00000473625 1624 ntBASIC20.8■□□□□ 0.92
PTPRFP10586 AC148477.5-201ENST00000625164 1645 ntBASIC20.8■□□□□ 0.92
PTPRFP10586 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PTPRFP10586 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PTPRFP10586 AC105339.3-201ENST00000560043 636 ntBASIC20.8■□□□□ 0.92
PTPRFP10586 AP001160.2-201ENST00000596071 487 ntBASIC20.8■□□□□ 0.92
PTPRFP10586 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTPRFP10586 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.8■□□□□ 0.92
PTPRFP10586 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
PTPRFP10586 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PTPRFP10586 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PTPRFP10586 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
PTPRFP10586 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PTPRFP10586 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PTPRFP10586 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PTPRFP10586 URGCP-206ENST00000446958 365 ntTSL 2 BASIC20.79■□□□□ 0.92
PTPRFP10586 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC20.79■□□□□ 0.92
PTPRFP10586 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC20.79■□□□□ 0.92
PTPRFP10586 AC002347.1-201ENST00000569543 541 ntBASIC20.79■□□□□ 0.92
PTPRFP10586 AL691403.2-201ENST00000618460 490 ntBASIC20.79■□□□□ 0.92
PTPRFP10586 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC20.79■□□□□ 0.92
PTPRFP10586 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
PTPRFP10586 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
PTPRFP10586 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC20.79■□□□□ 0.92
PTPRFP10586 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PTPRFP10586 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC20.79■□□□□ 0.92
PTPRFP10586 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC20.78■□□□□ 0.92
PTPRFP10586 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC20.78■□□□□ 0.92
PTPRFP10586 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC20.78■□□□□ 0.92
PTPRFP10586 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PTPRFP10586 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC20.78■□□□□ 0.92
PTPRFP10586 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
PTPRFP10586 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC20.78■□□□□ 0.92
PTPRFP10586 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC20.78■□□□□ 0.92
PTPRFP10586 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PTPRFP10586 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms