Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.89■□□□□ 0.61
CD48P09326 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.89■□□□□ 0.61
CD48P09326 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
CD48P09326 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.89■□□□□ 0.61
CD48P09326 AC092865.7-201ENST00000641832 219 ntBASIC18.89■□□□□ 0.61
CD48P09326 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CD48P09326 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CD48P09326 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.89■□□□□ 0.61
CD48P09326 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CD48P09326 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CD48P09326 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CD48P09326 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CD48P09326 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CD48P09326 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CD48P09326 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CD48P09326 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CD48P09326 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CD48P09326 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CD48P09326 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CD48P09326 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CD48P09326 AC134043.2-201ENST00000624206 2238 ntBASIC18.88■□□□□ 0.61
CD48P09326 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CD48P09326 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CD48P09326 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.88■□□□□ 0.61
CD48P09326 TERF1P1-201ENST00000311003 1181 ntBASIC18.88■□□□□ 0.61
CD48P09326 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.88■□□□□ 0.61
CD48P09326 AC113347.1-201ENST00000413321 391 ntBASIC18.88■□□□□ 0.61
CD48P09326 AC211429.1-201ENST00000415277 523 ntBASIC18.88■□□□□ 0.61
CD48P09326 AL441883.1-201ENST00000566170 1045 ntBASIC18.88■□□□□ 0.61
CD48P09326 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CD48P09326 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.88■□□□□ 0.61
CD48P09326 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.88■□□□□ 0.61
CD48P09326 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CD48P09326 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CD48P09326 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
CD48P09326 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CD48P09326 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CD48P09326 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CD48P09326 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CD48P09326 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.88■□□□□ 0.61
CD48P09326 AC073508.3-201ENST00000619697 1419 ntBASIC18.88■□□□□ 0.61
CD48P09326 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.88■□□□□ 0.61
CD48P09326 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CD48P09326 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CD48P09326 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CD48P09326 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CD48P09326 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CD48P09326 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CD48P09326 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CD48P09326 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CD48P09326 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.88■□□□□ 0.61
CD48P09326 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.88■□□□□ 0.61
CD48P09326 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CD48P09326 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.87■□□□□ 0.61
CD48P09326 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.87■□□□□ 0.61
CD48P09326 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CD48P09326 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CD48P09326 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CD48P09326 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CD48P09326 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CD48P09326 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CD48P09326 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
CD48P09326 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CD48P09326 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CD48P09326 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.87■□□□□ 0.61
CD48P09326 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CD48P09326 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.87■□□□□ 0.61
CD48P09326 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
CD48P09326 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CD48P09326 AC132938.6-201ENST00000623828 1655 ntBASIC18.87■□□□□ 0.61
CD48P09326 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CD48P09326 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CD48P09326 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CD48P09326 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.87■□□□□ 0.61
CD48P09326 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.87■□□□□ 0.61
CD48P09326 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CD48P09326 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CD48P09326 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CD48P09326 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.86■□□□□ 0.61
CD48P09326 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.86■□□□□ 0.61
CD48P09326 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CD48P09326 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
CD48P09326 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CD48P09326 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
CD48P09326 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CD48P09326 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CD48P09326 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CD48P09326 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CD48P09326 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CD48P09326 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CD48P09326 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CD48P09326 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CD48P09326 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.86■□□□□ 0.61
CD48P09326 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CD48P09326 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CD48P09326 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.86■□□□□ 0.61
CD48P09326 AC005521.1-201ENST00000393351 872 ntBASIC18.86■□□□□ 0.61
CD48P09326 AP000523.1-201ENST00000398242 1049 ntBASIC18.86■□□□□ 0.61
CD48P09326 LIN28AP1-201ENST00000429574 405 ntBASIC18.86■□□□□ 0.61
CD48P09326 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms