Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 SNCG-201ENST00000348795 684 ntTSL 2 BASIC21.87■■□□□ 1.09
CHGBP05060 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC21.87■■□□□ 1.09
CHGBP05060 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC21.87■■□□□ 1.09
CHGBP05060 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC21.87■■□□□ 1.09
CHGBP05060 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CHGBP05060 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CHGBP05060 PPOX-214ENST00000535223 664 ntTSL 3 BASIC21.87■■□□□ 1.09
CHGBP05060 AP002414.4-201ENST00000589764 1148 ntBASIC21.87■■□□□ 1.09
CHGBP05060 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC21.87■■□□□ 1.09
CHGBP05060 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC21.87■■□□□ 1.09
CHGBP05060 KRT89P-201ENST00000620027 1478 ntBASIC21.87■■□□□ 1.09
CHGBP05060 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CHGBP05060 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC21.87■■□□□ 1.09
CHGBP05060 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CHGBP05060 AC135050.7-201ENST00000624508 2218 ntBASIC21.87■■□□□ 1.09
CHGBP05060 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CHGBP05060 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CHGBP05060 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CHGBP05060 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CHGBP05060 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CHGBP05060 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
CHGBP05060 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CHGBP05060 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CHGBP05060 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CHGBP05060 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CHGBP05060 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CHGBP05060 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
CHGBP05060 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
CHGBP05060 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CHGBP05060 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC21.86■■□□□ 1.09
CHGBP05060 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CHGBP05060 BX276092.5-203ENST00000456199 560 ntBASIC21.86■■□□□ 1.09
CHGBP05060 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC21.86■■□□□ 1.09
CHGBP05060 RN7SL606P-201ENST00000472779 293 ntBASIC21.86■■□□□ 1.09
CHGBP05060 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC21.86■■□□□ 1.09
CHGBP05060 AP005901.3-202ENST00000581653 237 ntBASIC21.86■■□□□ 1.09
CHGBP05060 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC21.86■■□□□ 1.09
CHGBP05060 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CHGBP05060 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC21.86■■□□□ 1.09
CHGBP05060 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CHGBP05060 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC21.86■■□□□ 1.09
CHGBP05060 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CHGBP05060 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CHGBP05060 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC21.86■■□□□ 1.09
CHGBP05060 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CHGBP05060 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CHGBP05060 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CHGBP05060 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC21.86■■□□□ 1.09
CHGBP05060 AL354751.1-201ENST00000412768 1863 ntBASIC21.86■■□□□ 1.09
CHGBP05060 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC21.86■■□□□ 1.09
CHGBP05060 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CHGBP05060 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CHGBP05060 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CHGBP05060 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
CHGBP05060 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CHGBP05060 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CHGBP05060 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CHGBP05060 AP000997.3-201ENST00000623333 2250 ntBASIC21.85■■□□□ 1.09
CHGBP05060 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC21.85■■□□□ 1.09
CHGBP05060 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
CHGBP05060 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC21.85■■□□□ 1.09
CHGBP05060 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CHGBP05060 ATP5G2P1-201ENST00000433580 426 ntBASIC21.85■■□□□ 1.09
CHGBP05060 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC21.85■■□□□ 1.09
CHGBP05060 AC012313.10-201ENST00000623509 926 ntBASIC21.85■■□□□ 1.09
CHGBP05060 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CHGBP05060 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
CHGBP05060 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC21.85■■□□□ 1.09
CHGBP05060 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC21.85■■□□□ 1.09
CHGBP05060 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
CHGBP05060 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CHGBP05060 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CHGBP05060 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CHGBP05060 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC21.84■■□□□ 1.09
CHGBP05060 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CHGBP05060 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CHGBP05060 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC21.84■■□□□ 1.09
CHGBP05060 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CHGBP05060 AC093010.1-201ENST00000473625 1624 ntBASIC21.84■■□□□ 1.09
CHGBP05060 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC21.84■■□□□ 1.09
CHGBP05060 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CHGBP05060 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CHGBP05060 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
CHGBP05060 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC21.84■■□□□ 1.09
CHGBP05060 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC21.84■■□□□ 1.09
CHGBP05060 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CHGBP05060 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC21.84■■□□□ 1.09
CHGBP05060 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC21.84■■□□□ 1.09
CHGBP05060 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
CHGBP05060 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC21.84■■□□□ 1.09
CHGBP05060 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC21.84■■□□□ 1.09
CHGBP05060 TPSP2-201ENST00000561760 610 ntBASIC21.84■■□□□ 1.09
CHGBP05060 AL121672.3-201ENST00000608644 468 ntBASIC21.84■■□□□ 1.09
CHGBP05060 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CHGBP05060 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
CHGBP05060 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC21.84■■□□□ 1.09
CHGBP05060 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CHGBP05060 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CHGBP05060 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.84■■□□□ 1.09
CHGBP05060 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms