Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC16.41■□□□□ 0.22
HLA-DPB1P04440 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DPB1P04440 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DPB1P04440 AC008550.1-201ENST00000511500 884 ntBASIC16.41■□□□□ 0.22
HLA-DPB1P04440 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC16.41■□□□□ 0.22
HLA-DPB1P04440 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16.41■□□□□ 0.22
HLA-DPB1P04440 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC16.41■□□□□ 0.22
HLA-DPB1P04440 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC16.41■□□□□ 0.22
HLA-DPB1P04440 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.41■□□□□ 0.22
HLA-DPB1P04440 AC131212.4-201ENST00000623606 975 ntBASIC16.41■□□□□ 0.22
HLA-DPB1P04440 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DPB1P04440 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.41■□□□□ 0.22
HLA-DPB1P04440 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DPB1P04440 KRT16P1-201ENST00000399124 1418 ntBASIC16.41■□□□□ 0.22
HLA-DPB1P04440 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.41■□□□□ 0.22
HLA-DPB1P04440 PCDHA12-202ENST00000613593 2588 ntBASIC16.41■□□□□ 0.22
HLA-DPB1P04440 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DPB1P04440 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
HLA-DPB1P04440 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DPB1P04440 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DPB1P04440 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
HLA-DPB1P04440 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DPB1P04440 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DPB1P04440 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DPB1P04440 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DPB1P04440 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DPB1P04440 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
HLA-DPB1P04440 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DPB1P04440 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DPB1P04440 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DPB1P04440 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DPB1P04440 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DPB1P04440 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DPB1P04440 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.4■□□□□ 0.22
HLA-DPB1P04440 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DPB1P04440 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
HLA-DPB1P04440 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DPB1P04440 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DPB1P04440 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DPB1P04440 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DPB1P04440 AC004980.1-204ENST00000429707 299 ntBASIC16.4■□□□□ 0.22
HLA-DPB1P04440 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DPB1P04440 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.4■□□□□ 0.22
HLA-DPB1P04440 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC16.4■□□□□ 0.22
HLA-DPB1P04440 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.4■□□□□ 0.22
HLA-DPB1P04440 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC16.4■□□□□ 0.22
HLA-DPB1P04440 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.4■□□□□ 0.22
HLA-DPB1P04440 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.4■□□□□ 0.22
HLA-DPB1P04440 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.4■□□□□ 0.22
HLA-DPB1P04440 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.4■□□□□ 0.22
HLA-DPB1P04440 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.4■□□□□ 0.22
HLA-DPB1P04440 AP006294.2-201ENST00000641667 209 ntBASIC16.4■□□□□ 0.22
HLA-DPB1P04440 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
HLA-DPB1P04440 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DPB1P04440 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.4■□□□□ 0.22
HLA-DPB1P04440 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DPB1P04440 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.4■□□□□ 0.22
HLA-DPB1P04440 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DPB1P04440 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DPB1P04440 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DPB1P04440 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DPB1P04440 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.4■□□□□ 0.22
HLA-DPB1P04440 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DPB1P04440 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DPB1P04440 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DPB1P04440 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DPB1P04440 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
HLA-DPB1P04440 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.39■□□□□ 0.21
HLA-DPB1P04440 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.39■□□□□ 0.21
HLA-DPB1P04440 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DPB1P04440 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.39■□□□□ 0.21
HLA-DPB1P04440 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DPB1P04440 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DPB1P04440 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
HLA-DPB1P04440 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DPB1P04440 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.39■□□□□ 0.21
HLA-DPB1P04440 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DPB1P04440 PPP1R14BP5-201ENST00000440334 435 ntBASIC16.39■□□□□ 0.21
HLA-DPB1P04440 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
HLA-DPB1P04440 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DPB1P04440 DET1-205ENST00000558413 583 ntTSL 4 BASIC16.39■□□□□ 0.21
HLA-DPB1P04440 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
HLA-DPB1P04440 AC233702.5-201ENST00000584107 538 ntBASIC16.39■□□□□ 0.21
HLA-DPB1P04440 CD177P1-201ENST00000606252 935 ntBASIC16.39■□□□□ 0.21
HLA-DPB1P04440 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DPB1P04440 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DPB1P04440 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.39■□□□□ 0.21
HLA-DPB1P04440 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DPB1P04440 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
HLA-DPB1P04440 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DPB1P04440 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DPB1P04440 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
HLA-DPB1P04440 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DPB1P04440 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
HLA-DPB1P04440 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DPB1P04440 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.39■□□□□ 0.21
HLA-DPB1P04440 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
HLA-DPB1P04440 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DPB1P04440 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DPB1P04440 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms