Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.43■□□□□ 0.86
GGPS1O95749 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
GGPS1O95749 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
GGPS1O95749 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.43■□□□□ 0.86
GGPS1O95749 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
GGPS1O95749 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.42■□□□□ 0.86
GGPS1O95749 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
GGPS1O95749 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GGPS1O95749 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
GGPS1O95749 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
GGPS1O95749 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
GGPS1O95749 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.42■□□□□ 0.86
GGPS1O95749 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.42■□□□□ 0.86
GGPS1O95749 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
GGPS1O95749 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
GGPS1O95749 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.42■□□□□ 0.86
GGPS1O95749 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
GGPS1O95749 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
GGPS1O95749 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GGPS1O95749 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
GGPS1O95749 KRT16P4-201ENST00000453883 522 ntBASIC20.42■□□□□ 0.86
GGPS1O95749 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.42■□□□□ 0.86
GGPS1O95749 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
GGPS1O95749 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC20.42■□□□□ 0.86
GGPS1O95749 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC20.42■□□□□ 0.86
GGPS1O95749 BNIP3P18-201ENST00000593976 575 ntBASIC20.42■□□□□ 0.86
GGPS1O95749 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GGPS1O95749 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GGPS1O95749 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GGPS1O95749 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
GGPS1O95749 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
GGPS1O95749 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
GGPS1O95749 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC20.42■□□□□ 0.86
GGPS1O95749 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.42■□□□□ 0.86
GGPS1O95749 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
GGPS1O95749 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
GGPS1O95749 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.42■□□□□ 0.86
GGPS1O95749 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
GGPS1O95749 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GGPS1O95749 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GGPS1O95749 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
GGPS1O95749 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
GGPS1O95749 AKR1C7P-201ENST00000305623 895 ntBASIC20.41■□□□□ 0.86
GGPS1O95749 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC20.41■□□□□ 0.86
GGPS1O95749 AL160237.2-201ENST00000556165 472 ntBASIC20.41■□□□□ 0.86
GGPS1O95749 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
GGPS1O95749 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
GGPS1O95749 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
GGPS1O95749 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GGPS1O95749 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC20.41■□□□□ 0.86
GGPS1O95749 AL138781.2-201ENST00000617896 1843 ntBASIC20.41■□□□□ 0.86
GGPS1O95749 LINC00602-201ENST00000629776 2065 ntBASIC20.41■□□□□ 0.86
GGPS1O95749 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.41■□□□□ 0.86
GGPS1O95749 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
GGPS1O95749 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
GGPS1O95749 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
GGPS1O95749 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
GGPS1O95749 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
GGPS1O95749 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
GGPS1O95749 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
GGPS1O95749 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
GGPS1O95749 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC20.4■□□□□ 0.86
GGPS1O95749 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
GGPS1O95749 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
GGPS1O95749 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.4■□□□□ 0.86
GGPS1O95749 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
GGPS1O95749 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC20.4■□□□□ 0.86
GGPS1O95749 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
GGPS1O95749 AC068472.1-201ENST00000474589 881 ntBASIC20.4■□□□□ 0.86
GGPS1O95749 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
GGPS1O95749 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC20.4■□□□□ 0.86
GGPS1O95749 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
GGPS1O95749 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
GGPS1O95749 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC20.4■□□□□ 0.86
GGPS1O95749 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.4■□□□□ 0.86
GGPS1O95749 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
GGPS1O95749 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
GGPS1O95749 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.4■□□□□ 0.86
GGPS1O95749 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
GGPS1O95749 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
GGPS1O95749 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.39■□□□□ 0.86
GGPS1O95749 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
GGPS1O95749 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
GGPS1O95749 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
GGPS1O95749 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
GGPS1O95749 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
GGPS1O95749 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC20.39■□□□□ 0.85
GGPS1O95749 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GGPS1O95749 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GGPS1O95749 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC20.39■□□□□ 0.85
GGPS1O95749 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
GGPS1O95749 POM121L3P-201ENST00000419331 1163 ntBASIC20.39■□□□□ 0.85
GGPS1O95749 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC20.39■□□□□ 0.85
GGPS1O95749 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC20.39■□□□□ 0.85
GGPS1O95749 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC20.39■□□□□ 0.85
GGPS1O95749 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
GGPS1O95749 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC20.39■□□□□ 0.85
GGPS1O95749 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC20.39■□□□□ 0.85
GGPS1O95749 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GGPS1O95749 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms