Protein–RNA interactions for Protein: O95164

UBL3, Ubiquitin-like protein 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3O95164 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
UBL3O95164 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
UBL3O95164 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
UBL3O95164 AC134043.2-201ENST00000624206 2238 ntBASIC16.37■□□□□ 0.21
UBL3O95164 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
UBL3O95164 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
UBL3O95164 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
UBL3O95164 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
UBL3O95164 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
UBL3O95164 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.36■□□□□ 0.21
UBL3O95164 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
UBL3O95164 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
UBL3O95164 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
UBL3O95164 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.36■□□□□ 0.21
UBL3O95164 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
UBL3O95164 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
UBL3O95164 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
UBL3O95164 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
UBL3O95164 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
UBL3O95164 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
UBL3O95164 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
UBL3O95164 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.36■□□□□ 0.21
UBL3O95164 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
UBL3O95164 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
UBL3O95164 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
UBL3O95164 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
UBL3O95164 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
UBL3O95164 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
UBL3O95164 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
UBL3O95164 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.36■□□□□ 0.21
UBL3O95164 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
UBL3O95164 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
UBL3O95164 INGX-201ENST00000359239 846 ntBASIC16.36■□□□□ 0.21
UBL3O95164 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
UBL3O95164 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
UBL3O95164 AC211429.1-201ENST00000415277 523 ntBASIC16.36■□□□□ 0.21
UBL3O95164 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
UBL3O95164 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.36■□□□□ 0.21
UBL3O95164 MIR4674-201ENST00000582457 87 ntBASIC16.36■□□□□ 0.21
UBL3O95164 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.36■□□□□ 0.21
UBL3O95164 AC012306.2-201ENST00000609350 630 ntBASIC16.36■□□□□ 0.21
UBL3O95164 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
UBL3O95164 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
UBL3O95164 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
UBL3O95164 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
UBL3O95164 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
UBL3O95164 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.36■□□□□ 0.21
UBL3O95164 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
UBL3O95164 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
UBL3O95164 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.35■□□□□ 0.21
UBL3O95164 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBL3O95164 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.35■□□□□ 0.21
UBL3O95164 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
UBL3O95164 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
UBL3O95164 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.35■□□□□ 0.21
UBL3O95164 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
UBL3O95164 AC009053.2-201ENST00000563701 2365 ntBASIC16.35■□□□□ 0.21
UBL3O95164 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
UBL3O95164 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
UBL3O95164 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBL3O95164 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.35■□□□□ 0.21
UBL3O95164 LIN28AP1-201ENST00000429574 405 ntBASIC16.35■□□□□ 0.21
UBL3O95164 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.35■□□□□ 0.21
UBL3O95164 AC005363.2-201ENST00000618631 242 ntBASIC16.35■□□□□ 0.21
UBL3O95164 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.35■□□□□ 0.21
UBL3O95164 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
UBL3O95164 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
UBL3O95164 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBL3O95164 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBL3O95164 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
UBL3O95164 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
UBL3O95164 AC008556.1-201ENST00000610908 2040 ntBASIC16.35■□□□□ 0.21
UBL3O95164 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
UBL3O95164 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.34■□□□□ 0.21
UBL3O95164 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBL3O95164 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBL3O95164 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBL3O95164 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
UBL3O95164 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBL3O95164 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.34■□□□□ 0.21
UBL3O95164 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.34■□□□□ 0.21
UBL3O95164 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.34■□□□□ 0.21
UBL3O95164 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
UBL3O95164 SLC25A6P5-201ENST00000435663 894 ntBASIC16.34■□□□□ 0.21
UBL3O95164 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.34■□□□□ 0.21
UBL3O95164 SLC25A3P1-201ENST00000443844 931 ntBASIC16.34■□□□□ 0.21
UBL3O95164 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.34■□□□□ 0.21
UBL3O95164 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.34■□□□□ 0.21
UBL3O95164 WWOX-216ENST00000569818 525 ntBASIC16.34■□□□□ 0.21
UBL3O95164 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBL3O95164 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
UBL3O95164 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.34■□□□□ 0.21
UBL3O95164 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBL3O95164 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.34■□□□□ 0.21
UBL3O95164 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBL3O95164 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
UBL3O95164 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
UBL3O95164 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
UBL3O95164 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBL3O95164 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms