Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.67■□□□□ 0.74
RNF40O75150 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF40O75150 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.67■□□□□ 0.74
RNF40O75150 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF40O75150 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF40O75150 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RNF40O75150 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF40O75150 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.67■□□□□ 0.74
RNF40O75150 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RNF40O75150 AL353719.1-201ENST00000566847 864 ntBASIC19.67■□□□□ 0.74
RNF40O75150 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.67■□□□□ 0.74
RNF40O75150 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF40O75150 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RNF40O75150 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RNF40O75150 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RNF40O75150 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.67■□□□□ 0.74
RNF40O75150 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF40O75150 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
RNF40O75150 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF40O75150 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC19.67■□□□□ 0.74
RNF40O75150 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF40O75150 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.67■□□□□ 0.74
RNF40O75150 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.67■□□□□ 0.74
RNF40O75150 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.66■□□□□ 0.74
RNF40O75150 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF40O75150 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF40O75150 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF40O75150 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
RNF40O75150 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF40O75150 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RNF40O75150 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF40O75150 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RNF40O75150 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF40O75150 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF40O75150 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC19.66■□□□□ 0.74
RNF40O75150 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
RNF40O75150 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF40O75150 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.66■□□□□ 0.74
RNF40O75150 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.66■□□□□ 0.74
RNF40O75150 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.66■□□□□ 0.74
RNF40O75150 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.66■□□□□ 0.74
RNF40O75150 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC19.66■□□□□ 0.74
RNF40O75150 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.66■□□□□ 0.74
RNF40O75150 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.66■□□□□ 0.74
RNF40O75150 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
RNF40O75150 AC124067.4-201ENST00000519691 2379 ntBASIC19.66■□□□□ 0.74
RNF40O75150 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RNF40O75150 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF40O75150 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF40O75150 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RNF40O75150 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF40O75150 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF40O75150 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
RNF40O75150 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF40O75150 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RNF40O75150 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF40O75150 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF40O75150 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RNF40O75150 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.66■□□□□ 0.74
RNF40O75150 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF40O75150 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
RNF40O75150 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RNF40O75150 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF40O75150 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.65■□□□□ 0.74
RNF40O75150 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.65■□□□□ 0.74
RNF40O75150 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RNF40O75150 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
RNF40O75150 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.65■□□□□ 0.74
RNF40O75150 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.65■□□□□ 0.74
RNF40O75150 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
RNF40O75150 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.65■□□□□ 0.74
RNF40O75150 AP000550.4-202ENST00000639755 178 ntBASIC19.65■□□□□ 0.74
RNF40O75150 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC19.65■□□□□ 0.74
RNF40O75150 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF40O75150 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC19.65■□□□□ 0.74
RNF40O75150 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF40O75150 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF40O75150 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC19.65■□□□□ 0.74
RNF40O75150 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF40O75150 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
RNF40O75150 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF40O75150 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
RNF40O75150 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.64■□□□□ 0.74
RNF40O75150 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RNF40O75150 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
RNF40O75150 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
RNF40O75150 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
RNF40O75150 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RNF40O75150 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF40O75150 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF40O75150 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RNF40O75150 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.64■□□□□ 0.73
RNF40O75150 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.64■□□□□ 0.73
RNF40O75150 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.64■□□□□ 0.73
RNF40O75150 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.64■□□□□ 0.73
RNF40O75150 AL512604.3-201ENST00000569583 964 ntBASIC19.64■□□□□ 0.73
RNF40O75150 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF40O75150 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.64■□□□□ 0.73
RNF40O75150 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.64■□□□□ 0.73
RNF40O75150 SIRPAP1-201ENST00000448467 1770 ntBASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms