Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PFDN1O60925 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PFDN1O60925 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PFDN1O60925 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PFDN1O60925 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PFDN1O60925 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PFDN1O60925 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC16.31■□□□□ 0.2
PFDN1O60925 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC16.31■□□□□ 0.2
PFDN1O60925 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PFDN1O60925 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PFDN1O60925 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.31■□□□□ 0.2
PFDN1O60925 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
PFDN1O60925 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PFDN1O60925 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PFDN1O60925 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PFDN1O60925 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PFDN1O60925 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.31■□□□□ 0.2
PFDN1O60925 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PFDN1O60925 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PFDN1O60925 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PFDN1O60925 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PFDN1O60925 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PFDN1O60925 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
PFDN1O60925 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.3■□□□□ 0.2
PFDN1O60925 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.3■□□□□ 0.2
PFDN1O60925 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PFDN1O60925 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC16.3■□□□□ 0.2
PFDN1O60925 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
PFDN1O60925 AL161772.1-201ENST00000610494 4412 ntBASIC16.3■□□□□ 0.2
PFDN1O60925 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PFDN1O60925 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PFDN1O60925 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC16.3■□□□□ 0.2
PFDN1O60925 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.3■□□□□ 0.2
PFDN1O60925 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC16.3■□□□□ 0.2
PFDN1O60925 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PFDN1O60925 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PFDN1O60925 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PFDN1O60925 OR2I1P-207ENST00000453522 948 ntBASIC16.3■□□□□ 0.2
PFDN1O60925 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PFDN1O60925 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PFDN1O60925 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.3■□□□□ 0.2
PFDN1O60925 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PFDN1O60925 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PFDN1O60925 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PFDN1O60925 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PFDN1O60925 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.3■□□□□ 0.2
PFDN1O60925 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PFDN1O60925 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC16.3■□□□□ 0.2
PFDN1O60925 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PFDN1O60925 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PFDN1O60925 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
PFDN1O60925 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PFDN1O60925 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PFDN1O60925 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PFDN1O60925 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
PFDN1O60925 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC16.29■□□□□ 0.2
PFDN1O60925 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PFDN1O60925 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.29■□□□□ 0.2
PFDN1O60925 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PFDN1O60925 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PFDN1O60925 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PFDN1O60925 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PFDN1O60925 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.29■□□□□ 0.2
PFDN1O60925 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PFDN1O60925 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.29■□□□□ 0.2
PFDN1O60925 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC16.29■□□□□ 0.2
PFDN1O60925 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC16.29■□□□□ 0.2
PFDN1O60925 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC16.29■□□□□ 0.2
PFDN1O60925 AC104640.1-201ENST00000562617 2109 ntBASIC16.29■□□□□ 0.2
PFDN1O60925 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC16.29■□□□□ 0.2
PFDN1O60925 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PFDN1O60925 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PFDN1O60925 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PFDN1O60925 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.29■□□□□ 0.2
PFDN1O60925 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PFDN1O60925 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PFDN1O60925 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PFDN1O60925 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PFDN1O60925 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PFDN1O60925 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PFDN1O60925 AC144831.1-201ENST00000573312 2656 ntBASIC16.29■□□□□ 0.2
PFDN1O60925 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PFDN1O60925 AC093677.2-201ENST00000600169 1863 ntBASIC16.29■□□□□ 0.2
PFDN1O60925 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PFDN1O60925 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.29■□□□□ 0.2
PFDN1O60925 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PFDN1O60925 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PFDN1O60925 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PFDN1O60925 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PFDN1O60925 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.28■□□□□ 0.2
PFDN1O60925 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
PFDN1O60925 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PFDN1O60925 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PFDN1O60925 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.28■□□□□ 0.2
PFDN1O60925 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.28■□□□□ 0.2
PFDN1O60925 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PFDN1O60925 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PFDN1O60925 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PFDN1O60925 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PFDN1O60925 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms