Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PRAMEF4O60810 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRAMEF4O60810 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRAMEF4O60810 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.53■□□□□ 0.4
PRAMEF4O60810 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRAMEF4O60810 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
PRAMEF4O60810 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
PRAMEF4O60810 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRAMEF4O60810 PCDHB18P-201ENST00000524813 2368 ntBASIC17.53■□□□□ 0.4
PRAMEF4O60810 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRAMEF4O60810 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.53■□□□□ 0.4
PRAMEF4O60810 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRAMEF4O60810 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
PRAMEF4O60810 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRAMEF4O60810 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.53■□□□□ 0.4
PRAMEF4O60810 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PRAMEF4O60810 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.53■□□□□ 0.4
PRAMEF4O60810 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PRAMEF4O60810 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.53■□□□□ 0.4
PRAMEF4O60810 AC104076.2-201ENST00000448912 469 ntBASIC17.53■□□□□ 0.4
PRAMEF4O60810 KRT18P38-201ENST00000449496 1282 ntBASIC17.53■□□□□ 0.4
PRAMEF4O60810 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.53■□□□□ 0.4
PRAMEF4O60810 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.53■□□□□ 0.4
PRAMEF4O60810 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PRAMEF4O60810 LINC01023-201ENST00000606054 436 ntBASIC17.53■□□□□ 0.4
PRAMEF4O60810 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
PRAMEF4O60810 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PRAMEF4O60810 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PRAMEF4O60810 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRAMEF4O60810 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRAMEF4O60810 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRAMEF4O60810 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRAMEF4O60810 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRAMEF4O60810 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRAMEF4O60810 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.52■□□□□ 0.4
PRAMEF4O60810 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.52■□□□□ 0.4
PRAMEF4O60810 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRAMEF4O60810 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRAMEF4O60810 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRAMEF4O60810 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRAMEF4O60810 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRAMEF4O60810 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PRAMEF4O60810 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.4
PRAMEF4O60810 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRAMEF4O60810 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRAMEF4O60810 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
PRAMEF4O60810 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PRAMEF4O60810 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRAMEF4O60810 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.52■□□□□ 0.4
PRAMEF4O60810 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.52■□□□□ 0.4
PRAMEF4O60810 AC092597.1-201ENST00000487352 616 ntBASIC17.52■□□□□ 0.4
PRAMEF4O60810 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.52■□□□□ 0.4
PRAMEF4O60810 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.52■□□□□ 0.4
PRAMEF4O60810 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.52■□□□□ 0.4
PRAMEF4O60810 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRAMEF4O60810 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.52■□□□□ 0.4
PRAMEF4O60810 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRAMEF4O60810 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRAMEF4O60810 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.52■□□□□ 0.4
PRAMEF4O60810 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.52■□□□□ 0.4
PRAMEF4O60810 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PRAMEF4O60810 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.39
PRAMEF4O60810 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PRAMEF4O60810 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.39
PRAMEF4O60810 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.52■□□□□ 0.39
PRAMEF4O60810 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PRAMEF4O60810 AC026471.1-201ENST00000564629 3026 ntBASIC17.52■□□□□ 0.39
PRAMEF4O60810 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
PRAMEF4O60810 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.52■□□□□ 0.39
PRAMEF4O60810 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.51■□□□□ 0.39
PRAMEF4O60810 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRAMEF4O60810 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRAMEF4O60810 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRAMEF4O60810 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRAMEF4O60810 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
PRAMEF4O60810 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRAMEF4O60810 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.51■□□□□ 0.39
PRAMEF4O60810 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRAMEF4O60810 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
PRAMEF4O60810 RCN1P1-201ENST00000400413 996 ntBASIC17.51■□□□□ 0.39
PRAMEF4O60810 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRAMEF4O60810 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.51■□□□□ 0.39
PRAMEF4O60810 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.51■□□□□ 0.39
PRAMEF4O60810 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRAMEF4O60810 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.51■□□□□ 0.39
PRAMEF4O60810 LINC00167-201ENST00000530583 1419 ntBASIC17.51■□□□□ 0.39
PRAMEF4O60810 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
PRAMEF4O60810 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PRAMEF4O60810 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRAMEF4O60810 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
PRAMEF4O60810 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRAMEF4O60810 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
PRAMEF4O60810 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
PRAMEF4O60810 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
PRAMEF4O60810 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.51■□□□□ 0.39
PRAMEF4O60810 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.51■□□□□ 0.39
PRAMEF4O60810 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRAMEF4O60810 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PRAMEF4O60810 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRAMEF4O60810 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms