Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TSPAN3O60637 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.76■□□□□ 0.59
TSPAN3O60637 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TSPAN3O60637 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.76■□□□□ 0.59
TSPAN3O60637 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.76■□□□□ 0.59
TSPAN3O60637 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TSPAN3O60637 AL121894.2-201ENST00000602977 491 ntBASIC18.76■□□□□ 0.59
TSPAN3O60637 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TSPAN3O60637 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TSPAN3O60637 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TSPAN3O60637 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.76■□□□□ 0.59
TSPAN3O60637 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
TSPAN3O60637 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
TSPAN3O60637 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TSPAN3O60637 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TSPAN3O60637 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TSPAN3O60637 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TSPAN3O60637 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TSPAN3O60637 RNF165-205ENST00000588679 2904 ntBASIC18.75■□□□□ 0.59
TSPAN3O60637 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TSPAN3O60637 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TSPAN3O60637 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
TSPAN3O60637 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TSPAN3O60637 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TSPAN3O60637 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.75■□□□□ 0.59
TSPAN3O60637 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TSPAN3O60637 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TSPAN3O60637 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.75■□□□□ 0.59
TSPAN3O60637 AL450487.1-201ENST00000426799 995 ntBASIC18.75■□□□□ 0.59
TSPAN3O60637 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
TSPAN3O60637 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TSPAN3O60637 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.75■□□□□ 0.59
TSPAN3O60637 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.75■□□□□ 0.59
TSPAN3O60637 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.75■□□□□ 0.59
TSPAN3O60637 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.75■□□□□ 0.59
TSPAN3O60637 AL592071.1-201ENST00000611956 408 ntBASIC18.75■□□□□ 0.59
TSPAN3O60637 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.75■□□□□ 0.59
TSPAN3O60637 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TSPAN3O60637 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TSPAN3O60637 WIZP1-201ENST00000531444 2299 ntBASIC18.75■□□□□ 0.59
TSPAN3O60637 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TSPAN3O60637 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TSPAN3O60637 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TSPAN3O60637 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
TSPAN3O60637 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TSPAN3O60637 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TSPAN3O60637 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TSPAN3O60637 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.74■□□□□ 0.59
TSPAN3O60637 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TSPAN3O60637 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TSPAN3O60637 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TSPAN3O60637 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TSPAN3O60637 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
TSPAN3O60637 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TSPAN3O60637 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TSPAN3O60637 DRAXINP1-201ENST00000437611 948 ntBASIC18.74■□□□□ 0.59
TSPAN3O60637 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.74■□□□□ 0.59
TSPAN3O60637 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TSPAN3O60637 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.74■□□□□ 0.59
TSPAN3O60637 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
TSPAN3O60637 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.74■□□□□ 0.59
TSPAN3O60637 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.74■□□□□ 0.59
TSPAN3O60637 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.74■□□□□ 0.59
TSPAN3O60637 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TSPAN3O60637 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TSPAN3O60637 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
TSPAN3O60637 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.74■□□□□ 0.59
TSPAN3O60637 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TSPAN3O60637 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
TSPAN3O60637 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.74■□□□□ 0.59
TSPAN3O60637 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
TSPAN3O60637 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TSPAN3O60637 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
TSPAN3O60637 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.74■□□□□ 0.59
TSPAN3O60637 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.74■□□□□ 0.59
TSPAN3O60637 LINC00602-201ENST00000629776 2065 ntBASIC18.73■□□□□ 0.59
TSPAN3O60637 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TSPAN3O60637 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TSPAN3O60637 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TSPAN3O60637 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TSPAN3O60637 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TSPAN3O60637 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
TSPAN3O60637 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TSPAN3O60637 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.73■□□□□ 0.59
TSPAN3O60637 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TSPAN3O60637 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
TSPAN3O60637 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TSPAN3O60637 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TSPAN3O60637 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TSPAN3O60637 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.73■□□□□ 0.59
TSPAN3O60637 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TSPAN3O60637 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TSPAN3O60637 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.73■□□□□ 0.59
TSPAN3O60637 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.73■□□□□ 0.59
TSPAN3O60637 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.73■□□□□ 0.59
TSPAN3O60637 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TSPAN3O60637 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.73■□□□□ 0.59
TSPAN3O60637 PRELID1P1-202ENST00000567272 903 ntBASIC18.73■□□□□ 0.59
TSPAN3O60637 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.73■□□□□ 0.59
TSPAN3O60637 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms