Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDH7O60245 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.43■□□□□ 0.38
PCDH7O60245 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDH7O60245 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDH7O60245 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PCDH7O60245 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.43■□□□□ 0.38
PCDH7O60245 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDH7O60245 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDH7O60245 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDH7O60245 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDH7O60245 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDH7O60245 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDH7O60245 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
PCDH7O60245 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDH7O60245 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDH7O60245 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDH7O60245 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.42■□□□□ 0.38
PCDH7O60245 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
PCDH7O60245 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDH7O60245 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDH7O60245 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDH7O60245 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDH7O60245 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDH7O60245 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.42■□□□□ 0.38
PCDH7O60245 SEC1P-202ENST00000473944 940 ntBASIC17.42■□□□□ 0.38
PCDH7O60245 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.42■□□□□ 0.38
PCDH7O60245 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDH7O60245 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDH7O60245 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
PCDH7O60245 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDH7O60245 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDH7O60245 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDH7O60245 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDH7O60245 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
PCDH7O60245 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDH7O60245 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
PCDH7O60245 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDH7O60245 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.42■□□□□ 0.38
PCDH7O60245 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.42■□□□□ 0.38
PCDH7O60245 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH7O60245 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH7O60245 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH7O60245 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH7O60245 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH7O60245 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.41■□□□□ 0.38
PCDH7O60245 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH7O60245 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
PCDH7O60245 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.41■□□□□ 0.38
PCDH7O60245 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
PCDH7O60245 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH7O60245 LINC01126-201ENST00000623515 1646 ntBASIC17.41■□□□□ 0.38
PCDH7O60245 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH7O60245 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH7O60245 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.41■□□□□ 0.38
PCDH7O60245 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.41■□□□□ 0.38
PCDH7O60245 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH7O60245 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH7O60245 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.41■□□□□ 0.38
PCDH7O60245 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.41■□□□□ 0.38
PCDH7O60245 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.41■□□□□ 0.38
PCDH7O60245 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.41■□□□□ 0.38
PCDH7O60245 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
PCDH7O60245 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH7O60245 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH7O60245 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH7O60245 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.41■□□□□ 0.38
PCDH7O60245 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH7O60245 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH7O60245 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
PCDH7O60245 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH7O60245 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
PCDH7O60245 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH7O60245 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH7O60245 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH7O60245 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
PCDH7O60245 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.41■□□□□ 0.38
PCDH7O60245 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
PCDH7O60245 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDH7O60245 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDH7O60245 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDH7O60245 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PCDH7O60245 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDH7O60245 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
PCDH7O60245 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDH7O60245 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDH7O60245 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDH7O60245 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDH7O60245 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDH7O60245 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.4■□□□□ 0.38
PCDH7O60245 NEK4P2-201ENST00000580004 1012 ntBASIC17.4■□□□□ 0.38
PCDH7O60245 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.4■□□□□ 0.38
PCDH7O60245 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDH7O60245 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDH7O60245 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDH7O60245 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDH7O60245 KRT18P22-201ENST00000402024 1347 ntBASIC17.4■□□□□ 0.38
PCDH7O60245 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDH7O60245 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDH7O60245 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDH7O60245 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms