Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PDE6DO43924 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
PDE6DO43924 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PDE6DO43924 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PDE6DO43924 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PDE6DO43924 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PDE6DO43924 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC14.14□□□□□ -0.15
PDE6DO43924 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
PDE6DO43924 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PDE6DO43924 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PDE6DO43924 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
PDE6DO43924 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PDE6DO43924 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PDE6DO43924 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PDE6DO43924 AL512625.2-201ENST00000417533 625 ntBASIC14.14□□□□□ -0.15
PDE6DO43924 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PDE6DO43924 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PDE6DO43924 ISCU-212ENST00000547005 795 ntTSL 3 BASIC14.14□□□□□ -0.15
PDE6DO43924 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC14.14□□□□□ -0.15
PDE6DO43924 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC14.14□□□□□ -0.15
PDE6DO43924 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC14.14□□□□□ -0.15
PDE6DO43924 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC14.14□□□□□ -0.15
PDE6DO43924 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC14.14□□□□□ -0.15
PDE6DO43924 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
PDE6DO43924 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
PDE6DO43924 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
PDE6DO43924 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PDE6DO43924 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC14.14□□□□□ -0.15
PDE6DO43924 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PDE6DO43924 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PDE6DO43924 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
PDE6DO43924 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
PDE6DO43924 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
PDE6DO43924 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
PDE6DO43924 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PDE6DO43924 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PDE6DO43924 PHGDH-209ENST00000641074 1780 ntBASIC14.14□□□□□ -0.15
PDE6DO43924 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PDE6DO43924 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC14.14□□□□□ -0.15
PDE6DO43924 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
PDE6DO43924 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PDE6DO43924 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PDE6DO43924 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
PDE6DO43924 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PDE6DO43924 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PDE6DO43924 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
PDE6DO43924 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
PDE6DO43924 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PDE6DO43924 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PDE6DO43924 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PDE6DO43924 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
PDE6DO43924 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PDE6DO43924 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PDE6DO43924 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PDE6DO43924 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PDE6DO43924 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PDE6DO43924 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PDE6DO43924 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.13□□□□□ -0.15
PDE6DO43924 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PDE6DO43924 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PDE6DO43924 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC14.13□□□□□ -0.15
PDE6DO43924 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PDE6DO43924 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PDE6DO43924 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC14.13□□□□□ -0.15
PDE6DO43924 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC14.13□□□□□ -0.15
PDE6DO43924 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC14.13□□□□□ -0.15
PDE6DO43924 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC14.13□□□□□ -0.15
PDE6DO43924 KRT18P41-201ENST00000518924 1277 ntBASIC14.13□□□□□ -0.15
PDE6DO43924 DBI-210ENST00000542275 757 ntTSL 5 BASIC14.13□□□□□ -0.15
PDE6DO43924 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC14.13□□□□□ -0.15
PDE6DO43924 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC14.13□□□□□ -0.15
PDE6DO43924 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC14.13□□□□□ -0.15
PDE6DO43924 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
PDE6DO43924 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PDE6DO43924 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC14.13□□□□□ -0.15
PDE6DO43924 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PDE6DO43924 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
PDE6DO43924 KRT8P3-201ENST00000519669 1449 ntBASIC14.13□□□□□ -0.15
PDE6DO43924 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PDE6DO43924 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
PDE6DO43924 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PDE6DO43924 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
PDE6DO43924 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC14.13□□□□□ -0.15
PDE6DO43924 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PDE6DO43924 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
PDE6DO43924 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC14.13□□□□□ -0.15
PDE6DO43924 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC14.13□□□□□ -0.15
PDE6DO43924 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PDE6DO43924 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
PDE6DO43924 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
PDE6DO43924 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
PDE6DO43924 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.12□□□□□ -0.15
PDE6DO43924 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
PDE6DO43924 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PDE6DO43924 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC14.12□□□□□ -0.15
PDE6DO43924 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
PDE6DO43924 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PDE6DO43924 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PDE6DO43924 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC14.12□□□□□ -0.15
PDE6DO43924 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms