Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SMAD6O43541 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMAD6O43541 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.37■□□□□ 0.53
SMAD6O43541 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.37■□□□□ 0.53
SMAD6O43541 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.37■□□□□ 0.53
SMAD6O43541 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMAD6O43541 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMAD6O43541 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SMAD6O43541 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SMAD6O43541 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMAD6O43541 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.37■□□□□ 0.53
SMAD6O43541 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMAD6O43541 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.37■□□□□ 0.53
SMAD6O43541 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMAD6O43541 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMAD6O43541 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SMAD6O43541 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SMAD6O43541 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.36■□□□□ 0.53
SMAD6O43541 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SMAD6O43541 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SMAD6O43541 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SMAD6O43541 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SMAD6O43541 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SMAD6O43541 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SMAD6O43541 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SMAD6O43541 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SMAD6O43541 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SMAD6O43541 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SMAD6O43541 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SMAD6O43541 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SMAD6O43541 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.36■□□□□ 0.53
SMAD6O43541 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SMAD6O43541 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.36■□□□□ 0.53
SMAD6O43541 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SMAD6O43541 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SMAD6O43541 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.36■□□□□ 0.53
SMAD6O43541 AC068472.1-201ENST00000474589 881 ntBASIC18.36■□□□□ 0.53
SMAD6O43541 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SMAD6O43541 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
SMAD6O43541 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.36■□□□□ 0.53
SMAD6O43541 AL020996.1-203ENST00000536896 2307 ntBASIC18.36■□□□□ 0.53
SMAD6O43541 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.36■□□□□ 0.53
SMAD6O43541 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.36■□□□□ 0.53
SMAD6O43541 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SMAD6O43541 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.36■□□□□ 0.53
SMAD6O43541 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SMAD6O43541 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SMAD6O43541 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SMAD6O43541 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SMAD6O43541 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SMAD6O43541 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.35■□□□□ 0.53
SMAD6O43541 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SMAD6O43541 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
SMAD6O43541 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SMAD6O43541 AC090164.3-201ENST00000610780 2143 ntBASIC18.35■□□□□ 0.53
SMAD6O43541 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SMAD6O43541 AC093677.2-201ENST00000600169 1863 ntBASIC18.35■□□□□ 0.53
SMAD6O43541 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.35■□□□□ 0.53
SMAD6O43541 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
SMAD6O43541 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SMAD6O43541 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SMAD6O43541 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SMAD6O43541 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SMAD6O43541 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SMAD6O43541 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.35■□□□□ 0.53
SMAD6O43541 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.35■□□□□ 0.53
SMAD6O43541 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SMAD6O43541 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SMAD6O43541 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.35■□□□□ 0.53
SMAD6O43541 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.35■□□□□ 0.53
SMAD6O43541 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.35■□□□□ 0.53
SMAD6O43541 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.35■□□□□ 0.53
SMAD6O43541 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.35■□□□□ 0.53
SMAD6O43541 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
SMAD6O43541 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.35■□□□□ 0.53
SMAD6O43541 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.35■□□□□ 0.53
SMAD6O43541 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SMAD6O43541 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SMAD6O43541 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SMAD6O43541 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
SMAD6O43541 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SMAD6O43541 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMAD6O43541 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.34■□□□□ 0.53
SMAD6O43541 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMAD6O43541 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.34■□□□□ 0.53
SMAD6O43541 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.34■□□□□ 0.53
SMAD6O43541 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.34■□□□□ 0.53
SMAD6O43541 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SMAD6O43541 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SMAD6O43541 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.34■□□□□ 0.53
SMAD6O43541 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.34■□□□□ 0.53
SMAD6O43541 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMAD6O43541 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMAD6O43541 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.34■□□□□ 0.53
SMAD6O43541 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.34■□□□□ 0.53
SMAD6O43541 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.34■□□□□ 0.53
SMAD6O43541 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.34■□□□□ 0.53
SMAD6O43541 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.34■□□□□ 0.53
SMAD6O43541 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMAD6O43541 KRT126P-201ENST00000549467 1181 ntBASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms