Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PROM1O43490 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
PROM1O43490 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PROM1O43490 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PROM1O43490 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.32■□□□□ 0.36
PROM1O43490 AC034232.1-201ENST00000506026 1064 ntBASIC17.32■□□□□ 0.36
PROM1O43490 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PROM1O43490 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PROM1O43490 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.32■□□□□ 0.36
PROM1O43490 AC006011.2-201ENST00000621313 1158 ntBASIC17.32■□□□□ 0.36
PROM1O43490 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PROM1O43490 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PROM1O43490 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PROM1O43490 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PROM1O43490 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PROM1O43490 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.31■□□□□ 0.36
PROM1O43490 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PROM1O43490 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PROM1O43490 AL390961.4-201ENST00000623958 2535 ntBASIC17.31■□□□□ 0.36
PROM1O43490 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PROM1O43490 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.31■□□□□ 0.36
PROM1O43490 ABALON-201ENST00000629058 1903 ntBASIC17.31■□□□□ 0.36
PROM1O43490 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PROM1O43490 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
PROM1O43490 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.31■□□□□ 0.36
PROM1O43490 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PROM1O43490 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
PROM1O43490 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
PROM1O43490 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.31■□□□□ 0.36
PROM1O43490 AC104076.2-201ENST00000448912 469 ntBASIC17.31■□□□□ 0.36
PROM1O43490 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.31■□□□□ 0.36
PROM1O43490 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
PROM1O43490 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.31■□□□□ 0.36
PROM1O43490 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.31■□□□□ 0.36
PROM1O43490 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PROM1O43490 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
PROM1O43490 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PROM1O43490 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PROM1O43490 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PROM1O43490 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PROM1O43490 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PROM1O43490 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.3■□□□□ 0.36
PROM1O43490 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PROM1O43490 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PROM1O43490 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PROM1O43490 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PROM1O43490 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
PROM1O43490 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
PROM1O43490 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PROM1O43490 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PROM1O43490 RNF152P1-201ENST00000397754 604 ntBASIC17.3■□□□□ 0.36
PROM1O43490 TSPY5P-201ENST00000426936 936 ntBASIC17.3■□□□□ 0.36
PROM1O43490 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.3■□□□□ 0.36
PROM1O43490 PVRIG2P-201ENST00000435460 978 ntBASIC17.3■□□□□ 0.36
PROM1O43490 RASA4DP-201ENST00000460726 1199 ntBASIC17.3■□□□□ 0.36
PROM1O43490 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.3■□□□□ 0.36
PROM1O43490 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.3■□□□□ 0.36
PROM1O43490 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.3■□□□□ 0.36
PROM1O43490 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PROM1O43490 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PROM1O43490 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PROM1O43490 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PROM1O43490 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.3■□□□□ 0.36
PROM1O43490 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PROM1O43490 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.3■□□□□ 0.36
PROM1O43490 PCDHB18P-201ENST00000524813 2368 ntBASIC17.3■□□□□ 0.36
PROM1O43490 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PROM1O43490 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.3■□□□□ 0.36
PROM1O43490 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PROM1O43490 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
PROM1O43490 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PROM1O43490 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
PROM1O43490 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.3■□□□□ 0.36
PROM1O43490 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PROM1O43490 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PROM1O43490 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
PROM1O43490 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PROM1O43490 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PROM1O43490 LINC01126-201ENST00000623515 1646 ntBASIC17.29■□□□□ 0.36
PROM1O43490 AL024508.2-201ENST00000607749 1894 ntBASIC17.29■□□□□ 0.36
PROM1O43490 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PROM1O43490 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PROM1O43490 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PROM1O43490 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PROM1O43490 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PROM1O43490 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PROM1O43490 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PROM1O43490 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
PROM1O43490 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PROM1O43490 STARP1-201ENST00000397973 869 ntBASIC17.29■□□□□ 0.36
PROM1O43490 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PROM1O43490 AK4P3-201ENST00000418260 669 ntBASIC17.29■□□□□ 0.36
PROM1O43490 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.29■□□□□ 0.36
PROM1O43490 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.29■□□□□ 0.36
PROM1O43490 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PROM1O43490 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.29■□□□□ 0.36
PROM1O43490 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.29■□□□□ 0.36
PROM1O43490 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
PROM1O43490 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.29■□□□□ 0.36
PROM1O43490 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms