Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLOCKO15516 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLOCKO15516 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLOCKO15516 KRT8P32-201ENST00000512863 1461 ntBASIC17.34■□□□□ 0.37
CLOCKO15516 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.34■□□□□ 0.37
CLOCKO15516 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLOCKO15516 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CLOCKO15516 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.34■□□□□ 0.37
CLOCKO15516 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.34■□□□□ 0.37
CLOCKO15516 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.34■□□□□ 0.37
CLOCKO15516 AC110285.5-201ENST00000611501 352 ntBASIC17.34■□□□□ 0.37
CLOCKO15516 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CLOCKO15516 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLOCKO15516 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.34■□□□□ 0.37
CLOCKO15516 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CLOCKO15516 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CLOCKO15516 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLOCKO15516 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CLOCKO15516 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
CLOCKO15516 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
CLOCKO15516 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CLOCKO15516 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.37
CLOCKO15516 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.33■□□□□ 0.37
CLOCKO15516 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
CLOCKO15516 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.33■□□□□ 0.36
CLOCKO15516 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
CLOCKO15516 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLOCKO15516 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.33■□□□□ 0.36
CLOCKO15516 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.33■□□□□ 0.36
CLOCKO15516 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLOCKO15516 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLOCKO15516 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLOCKO15516 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CLOCKO15516 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CLOCKO15516 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.33■□□□□ 0.36
CLOCKO15516 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.33■□□□□ 0.36
CLOCKO15516 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.33■□□□□ 0.36
CLOCKO15516 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CLOCKO15516 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.33■□□□□ 0.36
CLOCKO15516 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.33■□□□□ 0.36
CLOCKO15516 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.33■□□□□ 0.36
CLOCKO15516 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CLOCKO15516 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLOCKO15516 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
CLOCKO15516 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.33■□□□□ 0.36
CLOCKO15516 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.33■□□□□ 0.36
CLOCKO15516 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CLOCKO15516 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLOCKO15516 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLOCKO15516 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CLOCKO15516 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
CLOCKO15516 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.32■□□□□ 0.36
CLOCKO15516 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.32■□□□□ 0.36
CLOCKO15516 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CLOCKO15516 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLOCKO15516 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.32■□□□□ 0.36
CLOCKO15516 AC133681.1-201ENST00000465482 601 ntBASIC17.32■□□□□ 0.36
CLOCKO15516 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.32■□□□□ 0.36
CLOCKO15516 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.32■□□□□ 0.36
CLOCKO15516 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.32■□□□□ 0.36
CLOCKO15516 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.32■□□□□ 0.36
CLOCKO15516 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLOCKO15516 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.32■□□□□ 0.36
CLOCKO15516 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.32■□□□□ 0.36
CLOCKO15516 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLOCKO15516 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLOCKO15516 AL357033.4-201ENST00000617703 1807 ntBASIC17.32■□□□□ 0.36
CLOCKO15516 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLOCKO15516 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLOCKO15516 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.32■□□□□ 0.36
CLOCKO15516 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
CLOCKO15516 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLOCKO15516 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLOCKO15516 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLOCKO15516 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.32■□□□□ 0.36
CLOCKO15516 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.32■□□□□ 0.36
CLOCKO15516 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.31■□□□□ 0.36
CLOCKO15516 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.31■□□□□ 0.36
CLOCKO15516 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CLOCKO15516 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLOCKO15516 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CLOCKO15516 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLOCKO15516 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.31■□□□□ 0.36
CLOCKO15516 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLOCKO15516 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLOCKO15516 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLOCKO15516 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CLOCKO15516 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.31■□□□□ 0.36
CLOCKO15516 AC108860.2-201ENST00000562760 2183 ntBASIC17.31■□□□□ 0.36
CLOCKO15516 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLOCKO15516 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLOCKO15516 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLOCKO15516 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLOCKO15516 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLOCKO15516 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLOCKO15516 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLOCKO15516 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.31■□□□□ 0.36
CLOCKO15516 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.31■□□□□ 0.36
CLOCKO15516 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLOCKO15516 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms