Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SMAD9O15198 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SMAD9O15198 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SMAD9O15198 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SMAD9O15198 AP000593.1-201ENST00000393668 712 ntBASIC16.56■□□□□ 0.24
SMAD9O15198 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SMAD9O15198 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
SMAD9O15198 TSPY5P-201ENST00000426936 936 ntBASIC16.56■□□□□ 0.24
SMAD9O15198 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SMAD9O15198 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SMAD9O15198 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.56■□□□□ 0.24
SMAD9O15198 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.56■□□□□ 0.24
SMAD9O15198 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.56■□□□□ 0.24
SMAD9O15198 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.56■□□□□ 0.24
SMAD9O15198 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.56■□□□□ 0.24
SMAD9O15198 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.56■□□□□ 0.24
SMAD9O15198 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
SMAD9O15198 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
SMAD9O15198 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SMAD9O15198 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SMAD9O15198 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SMAD9O15198 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SMAD9O15198 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SMAD9O15198 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.56■□□□□ 0.24
SMAD9O15198 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SMAD9O15198 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.56■□□□□ 0.24
SMAD9O15198 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
SMAD9O15198 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SMAD9O15198 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SMAD9O15198 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SMAD9O15198 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SMAD9O15198 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SMAD9O15198 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SMAD9O15198 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SMAD9O15198 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.55■□□□□ 0.24
SMAD9O15198 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SMAD9O15198 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.55■□□□□ 0.24
SMAD9O15198 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
SMAD9O15198 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SMAD9O15198 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SMAD9O15198 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SMAD9O15198 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SMAD9O15198 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SMAD9O15198 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
SMAD9O15198 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.55■□□□□ 0.24
SMAD9O15198 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.55■□□□□ 0.24
SMAD9O15198 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.55■□□□□ 0.24
SMAD9O15198 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
SMAD9O15198 MYC-208ENST00000641036 567 ntBASIC16.55■□□□□ 0.24
SMAD9O15198 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SMAD9O15198 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.55■□□□□ 0.24
SMAD9O15198 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SMAD9O15198 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SMAD9O15198 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
SMAD9O15198 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SMAD9O15198 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
SMAD9O15198 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SMAD9O15198 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SMAD9O15198 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SMAD9O15198 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
SMAD9O15198 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SMAD9O15198 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.55■□□□□ 0.24
SMAD9O15198 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SMAD9O15198 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SMAD9O15198 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
SMAD9O15198 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SMAD9O15198 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SMAD9O15198 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SMAD9O15198 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.54■□□□□ 0.24
SMAD9O15198 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
SMAD9O15198 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SMAD9O15198 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SMAD9O15198 AC009113.1-201ENST00000570267 2443 ntBASIC16.54■□□□□ 0.24
SMAD9O15198 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SMAD9O15198 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
SMAD9O15198 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SMAD9O15198 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.54■□□□□ 0.24
SMAD9O15198 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.54■□□□□ 0.24
SMAD9O15198 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SMAD9O15198 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SMAD9O15198 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.54■□□□□ 0.24
SMAD9O15198 AC063952.2-201ENST00000498792 1227 ntBASIC16.54■□□□□ 0.24
SMAD9O15198 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
SMAD9O15198 AC022616.7-201ENST00000525383 220 ntBASIC16.54■□□□□ 0.24
SMAD9O15198 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.54■□□□□ 0.24
SMAD9O15198 AC010240.3-201ENST00000607688 395 ntBASIC16.54■□□□□ 0.24
SMAD9O15198 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SMAD9O15198 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.54■□□□□ 0.24
SMAD9O15198 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SMAD9O15198 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
SMAD9O15198 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SMAD9O15198 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.54■□□□□ 0.24
SMAD9O15198 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
SMAD9O15198 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.54■□□□□ 0.24
SMAD9O15198 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SMAD9O15198 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.54■□□□□ 0.24
SMAD9O15198 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
SMAD9O15198 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.54■□□□□ 0.24
SMAD9O15198 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.54■□□□□ 0.24
SMAD9O15198 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms