Protein–RNA interactions for Protein: O15079

SNPH, Syntaphilin, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNPHO15079 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
SNPHO15079 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.26■□□□□ 0.35
SNPHO15079 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.26■□□□□ 0.35
SNPHO15079 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC17.26■□□□□ 0.35
SNPHO15079 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.26■□□□□ 0.35
SNPHO15079 OR10R2-202ENST00000641067 1132 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
SNPHO15079 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNPHO15079 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNPHO15079 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNPHO15079 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.26■□□□□ 0.35
SNPHO15079 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.26■□□□□ 0.35
SNPHO15079 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SNPHO15079 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNPHO15079 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNPHO15079 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SNPHO15079 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SNPHO15079 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNPHO15079 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SNPHO15079 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.26■□□□□ 0.35
SNPHO15079 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNPHO15079 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.26■□□□□ 0.35
SNPHO15079 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
SNPHO15079 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNPHO15079 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNPHO15079 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SNPHO15079 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNPHO15079 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SNPHO15079 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNPHO15079 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
SNPHO15079 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SNPHO15079 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SNPHO15079 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNPHO15079 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.25■□□□□ 0.35
SNPHO15079 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
SNPHO15079 KRT8P3-201ENST00000519669 1449 ntBASIC17.25■□□□□ 0.35
SNPHO15079 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNPHO15079 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNPHO15079 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.25■□□□□ 0.35
SNPHO15079 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
SNPHO15079 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.25■□□□□ 0.35
SNPHO15079 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.25■□□□□ 0.35
SNPHO15079 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC17.25■□□□□ 0.35
SNPHO15079 AC010422.1-201ENST00000414548 543 ntTSL 2 BASIC17.25■□□□□ 0.35
SNPHO15079 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.25■□□□□ 0.35
SNPHO15079 AP003041.3-201ENST00000527151 707 ntBASIC17.25■□□□□ 0.35
SNPHO15079 AC110921.1-201ENST00000577544 612 ntTSL 3 BASIC17.25■□□□□ 0.35
SNPHO15079 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SNPHO15079 FP475955.4-201ENST00000623131 1990 ntBASIC17.25■□□□□ 0.35
SNPHO15079 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.25■□□□□ 0.35
SNPHO15079 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNPHO15079 AC009053.2-201ENST00000563701 2365 ntBASIC17.25■□□□□ 0.35
SNPHO15079 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNPHO15079 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
SNPHO15079 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNPHO15079 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.25■□□□□ 0.35
SNPHO15079 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.25■□□□□ 0.35
SNPHO15079 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SNPHO15079 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
SNPHO15079 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SNPHO15079 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.24■□□□□ 0.35
SNPHO15079 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SNPHO15079 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
SNPHO15079 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNPHO15079 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNPHO15079 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNPHO15079 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNPHO15079 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SNPHO15079 RCN1P1-201ENST00000400413 996 ntBASIC17.24■□□□□ 0.35
SNPHO15079 MIR1224-201ENST00000408193 85 ntBASIC17.24■□□□□ 0.35
SNPHO15079 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.24■□□□□ 0.35
SNPHO15079 AL137013.1-201ENST00000432946 1228 ntBASIC17.24■□□□□ 0.35
SNPHO15079 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.24■□□□□ 0.35
SNPHO15079 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.24■□□□□ 0.35
SNPHO15079 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNPHO15079 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
SNPHO15079 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SNPHO15079 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNPHO15079 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
SNPHO15079 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.24■□□□□ 0.35
SNPHO15079 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNPHO15079 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.24■□□□□ 0.35
SNPHO15079 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNPHO15079 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SNPHO15079 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNPHO15079 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNPHO15079 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNPHO15079 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SNPHO15079 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.23■□□□□ 0.35
SNPHO15079 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.23■□□□□ 0.35
SNPHO15079 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
SNPHO15079 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNPHO15079 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SNPHO15079 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
SNPHO15079 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
SNPHO15079 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNPHO15079 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNPHO15079 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SNPHO15079 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.23■□□□□ 0.35
SNPHO15079 TERF1P1-201ENST00000311003 1181 ntBASIC17.23■□□□□ 0.35
SNPHO15079 AC005521.1-201ENST00000393351 872 ntBASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms