Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP2A1O14983 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ATP2A1O14983 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP2A1O14983 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
ATP2A1O14983 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC20.82■□□□□ 0.92
ATP2A1O14983 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
ATP2A1O14983 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC20.82■□□□□ 0.92
ATP2A1O14983 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
ATP2A1O14983 TP73-AS1-207ENST00000624167 988 ntBASIC20.82■□□□□ 0.92
ATP2A1O14983 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC20.82■□□□□ 0.92
ATP2A1O14983 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP2A1O14983 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP2A1O14983 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP2A1O14983 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.82■□□□□ 0.92
ATP2A1O14983 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ATP2A1O14983 TP73-AS1-210ENST00000637775 1455 ntBASIC20.81■□□□□ 0.92
ATP2A1O14983 AC099343.3-201ENST00000605834 2503 ntBASIC20.81■□□□□ 0.92
ATP2A1O14983 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
ATP2A1O14983 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
ATP2A1O14983 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP2A1O14983 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC20.81■□□□□ 0.92
ATP2A1O14983 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC20.81■□□□□ 0.92
ATP2A1O14983 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP2A1O14983 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP2A1O14983 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP2A1O14983 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP2A1O14983 RCN1P2-201ENST00000398357 915 ntBASIC20.81■□□□□ 0.92
ATP2A1O14983 KRT18P65-201ENST00000439811 1286 ntBASIC20.81■□□□□ 0.92
ATP2A1O14983 RNA5SP419-201ENST00000515908 135 ntBASIC20.81■□□□□ 0.92
ATP2A1O14983 AC009533.2-201ENST00000543664 586 ntBASIC20.81■□□□□ 0.92
ATP2A1O14983 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
ATP2A1O14983 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
ATP2A1O14983 AC064862.7-201ENST00000604520 867 ntBASIC20.81■□□□□ 0.92
ATP2A1O14983 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP2A1O14983 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP2A1O14983 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
ATP2A1O14983 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.81■□□□□ 0.92
ATP2A1O14983 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.81■□□□□ 0.92
ATP2A1O14983 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.81■□□□□ 0.92
ATP2A1O14983 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP2A1O14983 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.81■□□□□ 0.92
ATP2A1O14983 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP2A1O14983 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP2A1O14983 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP2A1O14983 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC20.8■□□□□ 0.92
ATP2A1O14983 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP2A1O14983 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP2A1O14983 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP2A1O14983 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ATP2A1O14983 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP2A1O14983 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP2A1O14983 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ATP2A1O14983 MEG3-211ENST00000452514 461 ntTSL 3 BASIC20.8■□□□□ 0.92
ATP2A1O14983 HCG11-201ENST00000411553 5696 ntBASIC20.8■□□□□ 0.92
ATP2A1O14983 LINC00602-201ENST00000629776 2065 ntBASIC20.8■□□□□ 0.92
ATP2A1O14983 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
ATP2A1O14983 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP2A1O14983 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.8■□□□□ 0.92
ATP2A1O14983 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
ATP2A1O14983 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
ATP2A1O14983 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.8■□□□□ 0.92
ATP2A1O14983 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC20.8■□□□□ 0.92
ATP2A1O14983 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP2A1O14983 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP2A1O14983 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATP2A1O14983 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ATP2A1O14983 AC125634.1-201ENST00000438758 1403 ntBASIC20.79■□□□□ 0.92
ATP2A1O14983 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC20.79■□□□□ 0.92
ATP2A1O14983 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ATP2A1O14983 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ATP2A1O14983 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
ATP2A1O14983 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.79■□□□□ 0.92
ATP2A1O14983 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATP2A1O14983 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ATP2A1O14983 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATP2A1O14983 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATP2A1O14983 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATP2A1O14983 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC20.79■□□□□ 0.92
ATP2A1O14983 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC20.79■□□□□ 0.92
ATP2A1O14983 AC132008.2-207ENST00000454517 770 ntBASIC20.79■□□□□ 0.92
ATP2A1O14983 PENK-208ENST00000523051 772 ntTSL 5 BASIC20.79■□□□□ 0.92
ATP2A1O14983 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC20.79■□□□□ 0.92
ATP2A1O14983 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC20.79■□□□□ 0.92
ATP2A1O14983 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATP2A1O14983 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ATP2A1O14983 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.79■□□□□ 0.92
ATP2A1O14983 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATP2A1O14983 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATP2A1O14983 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.79■□□□□ 0.92
ATP2A1O14983 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
ATP2A1O14983 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATP2A1O14983 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATP2A1O14983 ANO7L1-203ENST00000602586 1720 ntBASIC20.78■□□□□ 0.92
ATP2A1O14983 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.78■□□□□ 0.92
ATP2A1O14983 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATP2A1O14983 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC20.78■□□□□ 0.92
ATP2A1O14983 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATP2A1O14983 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
ATP2A1O14983 AL022342.1-201ENST00000400363 863 ntBASIC20.78■□□□□ 0.92
ATP2A1O14983 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms