Protein–RNA interactions for Protein: O14678

ABCD4, ATP-binding cassette sub-family D member 4, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4O14678 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
ABCD4O14678 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ABCD4O14678 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.14■□□□□ 0.17
ABCD4O14678 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.14■□□□□ 0.17
ABCD4O14678 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ABCD4O14678 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.14■□□□□ 0.17
ABCD4O14678 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.14■□□□□ 0.17
ABCD4O14678 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ABCD4O14678 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.14■□□□□ 0.17
ABCD4O14678 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
ABCD4O14678 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
ABCD4O14678 AL136038.3-201ENST00000561909 1096 ntBASIC16.14■□□□□ 0.17
ABCD4O14678 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.14■□□□□ 0.17
ABCD4O14678 HYMAI.1-201ENST00000620949 238 ntBASIC16.14■□□□□ 0.17
ABCD4O14678 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ABCD4O14678 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ABCD4O14678 KRT8P32-201ENST00000512863 1461 ntBASIC16.14■□□□□ 0.17
ABCD4O14678 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ABCD4O14678 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ABCD4O14678 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ABCD4O14678 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ABCD4O14678 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
ABCD4O14678 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
ABCD4O14678 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.14■□□□□ 0.17
ABCD4O14678 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ABCD4O14678 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ABCD4O14678 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
ABCD4O14678 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ABCD4O14678 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ABCD4O14678 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ABCD4O14678 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ABCD4O14678 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ABCD4O14678 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.13■□□□□ 0.17
ABCD4O14678 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
ABCD4O14678 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ABCD4O14678 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ABCD4O14678 AC009053.2-201ENST00000563701 2365 ntBASIC16.13■□□□□ 0.17
ABCD4O14678 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ABCD4O14678 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC16.13■□□□□ 0.17
ABCD4O14678 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ABCD4O14678 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.13■□□□□ 0.17
ABCD4O14678 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ABCD4O14678 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ABCD4O14678 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ABCD4O14678 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ABCD4O14678 KRT18P23-201ENST00000435622 1283 ntBASIC16.13■□□□□ 0.17
ABCD4O14678 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.13■□□□□ 0.17
ABCD4O14678 SEC1P-202ENST00000473944 940 ntBASIC16.13■□□□□ 0.17
ABCD4O14678 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ABCD4O14678 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ABCD4O14678 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ABCD4O14678 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.13■□□□□ 0.17
ABCD4O14678 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.13■□□□□ 0.17
ABCD4O14678 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.13■□□□□ 0.17
ABCD4O14678 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
ABCD4O14678 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ABCD4O14678 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
ABCD4O14678 AC068880.1-201ENST00000507289 2297 ntBASIC16.13■□□□□ 0.17
ABCD4O14678 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
ABCD4O14678 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
ABCD4O14678 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ABCD4O14678 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
ABCD4O14678 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ABCD4O14678 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.13■□□□□ 0.17
ABCD4O14678 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ABCD4O14678 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.13■□□□□ 0.17
ABCD4O14678 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ABCD4O14678 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.13■□□□□ 0.17
ABCD4O14678 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ABCD4O14678 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ABCD4O14678 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
ABCD4O14678 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.12■□□□□ 0.17
ABCD4O14678 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ABCD4O14678 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
ABCD4O14678 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ABCD4O14678 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
ABCD4O14678 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ABCD4O14678 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.12■□□□□ 0.17
ABCD4O14678 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ABCD4O14678 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
ABCD4O14678 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ABCD4O14678 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
ABCD4O14678 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ABCD4O14678 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.12■□□□□ 0.17
ABCD4O14678 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.12■□□□□ 0.17
ABCD4O14678 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ABCD4O14678 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.12■□□□□ 0.17
ABCD4O14678 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.12■□□□□ 0.17
ABCD4O14678 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ABCD4O14678 AC093458.2-201ENST00000623150 629 ntBASIC16.12■□□□□ 0.17
ABCD4O14678 AC116407.4-201ENST00000623319 1061 ntBASIC16.12■□□□□ 0.17
ABCD4O14678 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ABCD4O14678 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ABCD4O14678 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ABCD4O14678 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.12■□□□□ 0.17
ABCD4O14678 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.12■□□□□ 0.17
ABCD4O14678 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ABCD4O14678 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
ABCD4O14678 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
ABCD4O14678 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms