Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.21■□□□□ 0.35
CLIC1O00299 KRT8P7-201ENST00000533003 1432 ntBASIC17.21■□□□□ 0.34
CLIC1O00299 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
CLIC1O00299 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
CLIC1O00299 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLIC1O00299 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLIC1O00299 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLIC1O00299 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLIC1O00299 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.2■□□□□ 0.34
CLIC1O00299 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLIC1O00299 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.2■□□□□ 0.34
CLIC1O00299 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
CLIC1O00299 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLIC1O00299 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLIC1O00299 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CLIC1O00299 KRT18P23-201ENST00000435622 1283 ntBASIC17.2■□□□□ 0.34
CLIC1O00299 UBE2SP1-201ENST00000450587 669 ntBASIC17.2■□□□□ 0.34
CLIC1O00299 TSPY20P-201ENST00000450910 630 ntBASIC17.2■□□□□ 0.34
CLIC1O00299 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLIC1O00299 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLIC1O00299 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.2■□□□□ 0.34
CLIC1O00299 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLIC1O00299 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.2■□□□□ 0.34
CLIC1O00299 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.2■□□□□ 0.34
CLIC1O00299 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLIC1O00299 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLIC1O00299 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.2■□□□□ 0.34
CLIC1O00299 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.2■□□□□ 0.34
CLIC1O00299 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLIC1O00299 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLIC1O00299 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLIC1O00299 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.2■□□□□ 0.34
CLIC1O00299 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLIC1O00299 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLIC1O00299 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.2■□□□□ 0.34
CLIC1O00299 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLIC1O00299 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLIC1O00299 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLIC1O00299 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.2■□□□□ 0.34
CLIC1O00299 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CLIC1O00299 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.2■□□□□ 0.34
CLIC1O00299 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.2■□□□□ 0.34
CLIC1O00299 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLIC1O00299 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.19■□□□□ 0.34
CLIC1O00299 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLIC1O00299 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CLIC1O00299 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLIC1O00299 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLIC1O00299 AC093010.1-201ENST00000473625 1624 ntBASIC17.19■□□□□ 0.34
CLIC1O00299 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CLIC1O00299 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.19■□□□□ 0.34
CLIC1O00299 PRORSD1P-201ENST00000295112 541 ntBASIC17.19■□□□□ 0.34
CLIC1O00299 AC012618.2-201ENST00000428058 849 ntBASIC17.19■□□□□ 0.34
CLIC1O00299 AL355355.2-201ENST00000442321 338 ntBASIC17.19■□□□□ 0.34
CLIC1O00299 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLIC1O00299 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLIC1O00299 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.19■□□□□ 0.34
CLIC1O00299 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.19■□□□□ 0.34
CLIC1O00299 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.19■□□□□ 0.34
CLIC1O00299 AL049637.2-201ENST00000641778 930 ntBASIC17.19■□□□□ 0.34
CLIC1O00299 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLIC1O00299 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
CLIC1O00299 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLIC1O00299 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLIC1O00299 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLIC1O00299 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLIC1O00299 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.19■□□□□ 0.34
CLIC1O00299 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CLIC1O00299 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLIC1O00299 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.19■□□□□ 0.34
CLIC1O00299 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLIC1O00299 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CLIC1O00299 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CLIC1O00299 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLIC1O00299 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
CLIC1O00299 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.18■□□□□ 0.34
CLIC1O00299 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CLIC1O00299 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLIC1O00299 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLIC1O00299 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLIC1O00299 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLIC1O00299 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLIC1O00299 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLIC1O00299 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLIC1O00299 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLIC1O00299 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.18■□□□□ 0.34
CLIC1O00299 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CLIC1O00299 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.18■□□□□ 0.34
CLIC1O00299 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.18■□□□□ 0.34
CLIC1O00299 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.18■□□□□ 0.34
CLIC1O00299 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.18■□□□□ 0.34
CLIC1O00299 AP005242.2-201ENST00000580065 1175 ntBASIC17.18■□□□□ 0.34
CLIC1O00299 AC233702.5-201ENST00000584107 538 ntBASIC17.18■□□□□ 0.34
CLIC1O00299 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CLIC1O00299 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLIC1O00299 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLIC1O00299 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLIC1O00299 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.18■□□□□ 0.34
CLIC1O00299 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.18■□□□□ 0.34
CLIC1O00299 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms