Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.28■□□□□ 0.52
TRIM49D1C9J1S8 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
TRIM49D1C9J1S8 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
TRIM49D1C9J1S8 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
TRIM49D1C9J1S8 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM49D1C9J1S8 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM49D1C9J1S8 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM49D1C9J1S8 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
TRIM49D1C9J1S8 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM49D1C9J1S8 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.28■□□□□ 0.52
TRIM49D1C9J1S8 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.28■□□□□ 0.52
TRIM49D1C9J1S8 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM49D1C9J1S8 MIR3180-5-201ENST00000583743 153 ntBASIC18.28■□□□□ 0.52
TRIM49D1C9J1S8 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.28■□□□□ 0.52
TRIM49D1C9J1S8 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.28■□□□□ 0.52
TRIM49D1C9J1S8 PP12613-201ENST00000424958 2230 ntBASIC18.28■□□□□ 0.52
TRIM49D1C9J1S8 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
TRIM49D1C9J1S8 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.28■□□□□ 0.52
TRIM49D1C9J1S8 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM49D1C9J1S8 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
TRIM49D1C9J1S8 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM49D1C9J1S8 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM49D1C9J1S8 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM49D1C9J1S8 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM49D1C9J1S8 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.28■□□□□ 0.52
TRIM49D1C9J1S8 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM49D1C9J1S8 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.27■□□□□ 0.52
TRIM49D1C9J1S8 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.27■□□□□ 0.52
TRIM49D1C9J1S8 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM49D1C9J1S8 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
TRIM49D1C9J1S8 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM49D1C9J1S8 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM49D1C9J1S8 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM49D1C9J1S8 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
TRIM49D1C9J1S8 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM49D1C9J1S8 MIR149-201ENST00000384879 89 ntBASIC18.27■□□□□ 0.52
TRIM49D1C9J1S8 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
TRIM49D1C9J1S8 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.27■□□□□ 0.52
TRIM49D1C9J1S8 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
TRIM49D1C9J1S8 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM49D1C9J1S8 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.27■□□□□ 0.52
TRIM49D1C9J1S8 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.27■□□□□ 0.52
TRIM49D1C9J1S8 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM49D1C9J1S8 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.27■□□□□ 0.51
TRIM49D1C9J1S8 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.27■□□□□ 0.51
TRIM49D1C9J1S8 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRIM49D1C9J1S8 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TRIM49D1C9J1S8 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TRIM49D1C9J1S8 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
TRIM49D1C9J1S8 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.27■□□□□ 0.51
TRIM49D1C9J1S8 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRIM49D1C9J1S8 AC093010.1-201ENST00000473625 1624 ntBASIC18.27■□□□□ 0.51
TRIM49D1C9J1S8 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.27■□□□□ 0.51
TRIM49D1C9J1S8 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
TRIM49D1C9J1S8 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM49D1C9J1S8 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM49D1C9J1S8 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.26■□□□□ 0.51
TRIM49D1C9J1S8 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM49D1C9J1S8 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM49D1C9J1S8 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
TRIM49D1C9J1S8 AC036111.1-201ENST00000533973 1582 ntBASIC18.26■□□□□ 0.51
TRIM49D1C9J1S8 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM49D1C9J1S8 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM49D1C9J1S8 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM49D1C9J1S8 AC108860.2-201ENST00000562760 2183 ntBASIC18.26■□□□□ 0.51
TRIM49D1C9J1S8 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TRIM49D1C9J1S8 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
TRIM49D1C9J1S8 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.26■□□□□ 0.51
TRIM49D1C9J1S8 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM49D1C9J1S8 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.26■□□□□ 0.51
TRIM49D1C9J1S8 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.26■□□□□ 0.51
TRIM49D1C9J1S8 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.26■□□□□ 0.51
TRIM49D1C9J1S8 MIR4674-201ENST00000582457 87 ntBASIC18.26■□□□□ 0.51
TRIM49D1C9J1S8 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.26■□□□□ 0.51
TRIM49D1C9J1S8 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.26■□□□□ 0.51
TRIM49D1C9J1S8 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.26■□□□□ 0.51
TRIM49D1C9J1S8 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM49D1C9J1S8 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.26■□□□□ 0.51
TRIM49D1C9J1S8 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.26■□□□□ 0.51
TRIM49D1C9J1S8 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
TRIM49D1C9J1S8 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM49D1C9J1S8 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM49D1C9J1S8 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.26■□□□□ 0.51
TRIM49D1C9J1S8 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM49D1C9J1S8 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
TRIM49D1C9J1S8 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.26■□□□□ 0.51
TRIM49D1C9J1S8 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM49D1C9J1S8 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM49D1C9J1S8 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM49D1C9J1S8 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
TRIM49D1C9J1S8 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM49D1C9J1S8 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM49D1C9J1S8 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.25■□□□□ 0.51
TRIM49D1C9J1S8 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM49D1C9J1S8 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM49D1C9J1S8 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.25■□□□□ 0.51
TRIM49D1C9J1S8 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
TRIM49D1C9J1S8 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM49D1C9J1S8 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.25■□□□□ 0.51
TRIM49D1C9J1S8 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms