Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC21.08■□□□□ 0.97
TMEM88BA6NKF7 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC21.08■□□□□ 0.97
TMEM88BA6NKF7 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TMEM88BA6NKF7 SIGLEC16-201ENST00000599858 1437 ntBASIC21.08■□□□□ 0.97
TMEM88BA6NKF7 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TMEM88BA6NKF7 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC21.08■□□□□ 0.97
TMEM88BA6NKF7 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.08■□□□□ 0.96
TMEM88BA6NKF7 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
TMEM88BA6NKF7 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC21.08■□□□□ 0.96
TMEM88BA6NKF7 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
TMEM88BA6NKF7 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TMEM88BA6NKF7 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC21.07■□□□□ 0.96
TMEM88BA6NKF7 BCAR1-209ENST00000546196 1340 ntBASIC21.07■□□□□ 0.96
TMEM88BA6NKF7 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC21.07■□□□□ 0.96
TMEM88BA6NKF7 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TMEM88BA6NKF7 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC21.07■□□□□ 0.96
TMEM88BA6NKF7 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TMEM88BA6NKF7 NEK7-201ENST00000367383 586 ntTSL 2 BASIC21.07■□□□□ 0.96
TMEM88BA6NKF7 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TMEM88BA6NKF7 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TMEM88BA6NKF7 AC236430.1-201ENST00000402231 743 ntBASIC21.07■□□□□ 0.96
TMEM88BA6NKF7 IGLL3P-201ENST00000412472 434 ntBASIC21.07■□□□□ 0.96
TMEM88BA6NKF7 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC21.07■□□□□ 0.96
TMEM88BA6NKF7 KRT18P65-201ENST00000439811 1286 ntBASIC21.07■□□□□ 0.96
TMEM88BA6NKF7 OARD1-208ENST00000469104 704 ntTSL 2 BASIC21.07■□□□□ 0.96
TMEM88BA6NKF7 KRT19P2-202ENST00000557173 1012 ntBASIC21.07■□□□□ 0.96
TMEM88BA6NKF7 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
TMEM88BA6NKF7 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC21.07■□□□□ 0.96
TMEM88BA6NKF7 AC008667.4-201ENST00000607370 168 ntBASIC21.07■□□□□ 0.96
TMEM88BA6NKF7 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC21.07■□□□□ 0.96
TMEM88BA6NKF7 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC21.07■□□□□ 0.96
TMEM88BA6NKF7 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC21.07■□□□□ 0.96
TMEM88BA6NKF7 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TMEM88BA6NKF7 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
TMEM88BA6NKF7 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC21.07■□□□□ 0.96
TMEM88BA6NKF7 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TMEM88BA6NKF7 UROS-202ENST00000368778 1556 ntTSL 2 BASIC21.06■□□□□ 0.96
TMEM88BA6NKF7 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
TMEM88BA6NKF7 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TMEM88BA6NKF7 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TMEM88BA6NKF7 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
TMEM88BA6NKF7 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC21.06■□□□□ 0.96
TMEM88BA6NKF7 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC21.06■□□□□ 0.96
TMEM88BA6NKF7 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC21.06■□□□□ 0.96
TMEM88BA6NKF7 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
TMEM88BA6NKF7 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC21.06■□□□□ 0.96
TMEM88BA6NKF7 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC21.06■□□□□ 0.96
TMEM88BA6NKF7 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC21.06■□□□□ 0.96
TMEM88BA6NKF7 AC023141.5-201ENST00000458585 616 ntBASIC21.06■□□□□ 0.96
TMEM88BA6NKF7 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC21.06■□□□□ 0.96
TMEM88BA6NKF7 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC21.06■□□□□ 0.96
TMEM88BA6NKF7 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC21.06■□□□□ 0.96
TMEM88BA6NKF7 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
TMEM88BA6NKF7 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
TMEM88BA6NKF7 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TMEM88BA6NKF7 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
TMEM88BA6NKF7 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TMEM88BA6NKF7 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
TMEM88BA6NKF7 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC21.06■□□□□ 0.96
TMEM88BA6NKF7 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TMEM88BA6NKF7 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
TMEM88BA6NKF7 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TMEM88BA6NKF7 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC21.05■□□□□ 0.96
TMEM88BA6NKF7 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TMEM88BA6NKF7 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TMEM88BA6NKF7 AL024508.2-201ENST00000607749 1894 ntBASIC21.05■□□□□ 0.96
TMEM88BA6NKF7 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC21.05■□□□□ 0.96
TMEM88BA6NKF7 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.05■□□□□ 0.96
TMEM88BA6NKF7 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC21.05■□□□□ 0.96
TMEM88BA6NKF7 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TMEM88BA6NKF7 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
TMEM88BA6NKF7 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TMEM88BA6NKF7 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TMEM88BA6NKF7 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TMEM88BA6NKF7 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
TMEM88BA6NKF7 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
TMEM88BA6NKF7 AC002472.2-201ENST00000442739 958 ntBASIC21.05■□□□□ 0.96
TMEM88BA6NKF7 AC074386.1-202ENST00000463561 864 ntBASIC21.05■□□□□ 0.96
TMEM88BA6NKF7 ARTN-206ENST00000472435 402 ntTSL 3 BASIC21.05■□□□□ 0.96
TMEM88BA6NKF7 AC112698.1-201ENST00000510299 916 ntBASIC21.05■□□□□ 0.96
TMEM88BA6NKF7 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC21.05■□□□□ 0.96
TMEM88BA6NKF7 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
TMEM88BA6NKF7 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC21.05■□□□□ 0.96
TMEM88BA6NKF7 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TMEM88BA6NKF7 AC091812.2-201ENST00000619081 385 ntBASIC21.05■□□□□ 0.96
TMEM88BA6NKF7 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC21.05■□□□□ 0.96
TMEM88BA6NKF7 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC21.05■□□□□ 0.96
TMEM88BA6NKF7 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
TMEM88BA6NKF7 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.05■□□□□ 0.96
TMEM88BA6NKF7 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TMEM88BA6NKF7 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TMEM88BA6NKF7 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TMEM88BA6NKF7 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TMEM88BA6NKF7 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
TMEM88BA6NKF7 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TMEM88BA6NKF7 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.04■□□□□ 0.96
TMEM88BA6NKF7 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TMEM88BA6NKF7 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
TMEM88BA6NKF7 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TMEM88BA6NKF7 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms