Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TBC1D3FA6NER0 AC020763.4-201ENST00000623414 4170 ntBASIC18.13■□□□□ 0.49
TBC1D3FA6NER0 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.13■□□□□ 0.49
TBC1D3FA6NER0 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TBC1D3FA6NER0 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TBC1D3FA6NER0 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TBC1D3FA6NER0 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
TBC1D3FA6NER0 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TBC1D3FA6NER0 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.13■□□□□ 0.49
TBC1D3FA6NER0 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TBC1D3FA6NER0 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.13■□□□□ 0.49
TBC1D3FA6NER0 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.12■□□□□ 0.49
TBC1D3FA6NER0 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TBC1D3FA6NER0 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
TBC1D3FA6NER0 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TBC1D3FA6NER0 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TBC1D3FA6NER0 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TBC1D3FA6NER0 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TBC1D3FA6NER0 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TBC1D3FA6NER0 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TBC1D3FA6NER0 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
TBC1D3FA6NER0 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TBC1D3FA6NER0 AC009078.2-202ENST00000463353 338 ntBASIC18.12■□□□□ 0.49
TBC1D3FA6NER0 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.12■□□□□ 0.49
TBC1D3FA6NER0 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TBC1D3FA6NER0 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.12■□□□□ 0.49
TBC1D3FA6NER0 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
TBC1D3FA6NER0 AC104692.2-201ENST00000603054 253 ntBASIC18.12■□□□□ 0.49
TBC1D3FA6NER0 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.12■□□□□ 0.49
TBC1D3FA6NER0 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TBC1D3FA6NER0 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TBC1D3FA6NER0 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TBC1D3FA6NER0 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TBC1D3FA6NER0 ANO7L1-203ENST00000602586 1720 ntBASIC18.12■□□□□ 0.49
TBC1D3FA6NER0 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.12■□□□□ 0.49
TBC1D3FA6NER0 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
TBC1D3FA6NER0 LINC00602-201ENST00000629776 2065 ntBASIC18.11■□□□□ 0.49
TBC1D3FA6NER0 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
TBC1D3FA6NER0 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
TBC1D3FA6NER0 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TBC1D3FA6NER0 AC068472.1-201ENST00000474589 881 ntBASIC18.11■□□□□ 0.49
TBC1D3FA6NER0 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.11■□□□□ 0.49
TBC1D3FA6NER0 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.11■□□□□ 0.49
TBC1D3FA6NER0 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TBC1D3FA6NER0 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TBC1D3FA6NER0 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TBC1D3FA6NER0 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TBC1D3FA6NER0 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TBC1D3FA6NER0 BX323043.1-201ENST00000641006 1765 ntBASIC18.11■□□□□ 0.49
TBC1D3FA6NER0 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TBC1D3FA6NER0 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TBC1D3FA6NER0 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TBC1D3FA6NER0 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.11■□□□□ 0.49
TBC1D3FA6NER0 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.11■□□□□ 0.49
TBC1D3FA6NER0 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TBC1D3FA6NER0 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TBC1D3FA6NER0 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.11■□□□□ 0.49
TBC1D3FA6NER0 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.11■□□□□ 0.49
TBC1D3FA6NER0 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TBC1D3FA6NER0 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TBC1D3FA6NER0 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
TBC1D3FA6NER0 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TBC1D3FA6NER0 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
TBC1D3FA6NER0 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TBC1D3FA6NER0 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TBC1D3FA6NER0 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
TBC1D3FA6NER0 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TBC1D3FA6NER0 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
TBC1D3FA6NER0 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
TBC1D3FA6NER0 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TBC1D3FA6NER0 LINC01126-201ENST00000623515 1646 ntBASIC18.1■□□□□ 0.49
TBC1D3FA6NER0 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.1■□□□□ 0.49
TBC1D3FA6NER0 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TBC1D3FA6NER0 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.1■□□□□ 0.49
TBC1D3FA6NER0 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.1■□□□□ 0.49
TBC1D3FA6NER0 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TBC1D3FA6NER0 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
TBC1D3FA6NER0 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.1■□□□□ 0.49
TBC1D3FA6NER0 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TBC1D3FA6NER0 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.1■□□□□ 0.49
TBC1D3FA6NER0 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TBC1D3FA6NER0 AL121912.1-201ENST00000603683 238 ntBASIC18.1■□□□□ 0.49
TBC1D3FA6NER0 AL591684.3-201ENST00000605187 298 ntBASIC18.1■□□□□ 0.49
TBC1D3FA6NER0 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TBC1D3FA6NER0 RNF165-205ENST00000588679 2904 ntBASIC18.1■□□□□ 0.49
TBC1D3FA6NER0 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TBC1D3FA6NER0 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TBC1D3FA6NER0 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
TBC1D3FA6NER0 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.09■□□□□ 0.49
TBC1D3FA6NER0 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
TBC1D3FA6NER0 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TBC1D3FA6NER0 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TBC1D3FA6NER0 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.09■□□□□ 0.49
TBC1D3FA6NER0 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TBC1D3FA6NER0 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TBC1D3FA6NER0 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
TBC1D3FA6NER0 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TBC1D3FA6NER0 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.09■□□□□ 0.49
TBC1D3FA6NER0 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.09■□□□□ 0.49
TBC1D3FA6NER0 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms