Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TBC1D3BA6NDS4 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
TBC1D3BA6NDS4 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TBC1D3BA6NDS4 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TBC1D3BA6NDS4 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TBC1D3BA6NDS4 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.48■□□□□ 0.55
TBC1D3BA6NDS4 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.48■□□□□ 0.55
TBC1D3BA6NDS4 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.48■□□□□ 0.55
TBC1D3BA6NDS4 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TBC1D3BA6NDS4 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TBC1D3BA6NDS4 AC064862.7-201ENST00000604520 867 ntBASIC18.48■□□□□ 0.55
TBC1D3BA6NDS4 AC114341.1-201ENST00000618070 349 ntBASIC18.48■□□□□ 0.55
TBC1D3BA6NDS4 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.48■□□□□ 0.55
TBC1D3BA6NDS4 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TBC1D3BA6NDS4 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
TBC1D3BA6NDS4 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TBC1D3BA6NDS4 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
TBC1D3BA6NDS4 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TBC1D3BA6NDS4 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TBC1D3BA6NDS4 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TBC1D3BA6NDS4 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TBC1D3BA6NDS4 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TBC1D3BA6NDS4 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.47■□□□□ 0.55
TBC1D3BA6NDS4 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.47■□□□□ 0.55
TBC1D3BA6NDS4 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TBC1D3BA6NDS4 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TBC1D3BA6NDS4 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.47■□□□□ 0.55
TBC1D3BA6NDS4 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
TBC1D3BA6NDS4 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TBC1D3BA6NDS4 AL022342.1-201ENST00000400363 863 ntBASIC18.47■□□□□ 0.55
TBC1D3BA6NDS4 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.47■□□□□ 0.55
TBC1D3BA6NDS4 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.47■□□□□ 0.55
TBC1D3BA6NDS4 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.47■□□□□ 0.55
TBC1D3BA6NDS4 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.47■□□□□ 0.55
TBC1D3BA6NDS4 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.47■□□□□ 0.55
TBC1D3BA6NDS4 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TBC1D3BA6NDS4 AC009154.2-201ENST00000621177 724 ntBASIC18.47■□□□□ 0.55
TBC1D3BA6NDS4 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TBC1D3BA6NDS4 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TBC1D3BA6NDS4 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.47■□□□□ 0.55
TBC1D3BA6NDS4 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TBC1D3BA6NDS4 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.46■□□□□ 0.55
TBC1D3BA6NDS4 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.46■□□□□ 0.55
TBC1D3BA6NDS4 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TBC1D3BA6NDS4 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
TBC1D3BA6NDS4 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TBC1D3BA6NDS4 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TBC1D3BA6NDS4 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TBC1D3BA6NDS4 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TBC1D3BA6NDS4 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TBC1D3BA6NDS4 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TBC1D3BA6NDS4 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TBC1D3BA6NDS4 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TBC1D3BA6NDS4 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TBC1D3BA6NDS4 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TBC1D3BA6NDS4 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
TBC1D3BA6NDS4 MTCL1P1-201ENST00000446207 792 ntBASIC18.46■□□□□ 0.55
TBC1D3BA6NDS4 AC132008.2-207ENST00000454517 770 ntBASIC18.46■□□□□ 0.55
TBC1D3BA6NDS4 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.55
TBC1D3BA6NDS4 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.46■□□□□ 0.55
TBC1D3BA6NDS4 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
TBC1D3BA6NDS4 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.46■□□□□ 0.55
TBC1D3BA6NDS4 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.46■□□□□ 0.55
TBC1D3BA6NDS4 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
TBC1D3BA6NDS4 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.46■□□□□ 0.55
TBC1D3BA6NDS4 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.46■□□□□ 0.55
TBC1D3BA6NDS4 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
TBC1D3BA6NDS4 AC005082.1-201ENST00000413042 2259 ntBASIC18.46■□□□□ 0.54
TBC1D3BA6NDS4 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
TBC1D3BA6NDS4 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.46■□□□□ 0.54
TBC1D3BA6NDS4 TP73-AS1-210ENST00000637775 1455 ntBASIC18.46■□□□□ 0.54
TBC1D3BA6NDS4 LINC01126-201ENST00000623515 1646 ntBASIC18.45■□□□□ 0.54
TBC1D3BA6NDS4 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TBC1D3BA6NDS4 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
TBC1D3BA6NDS4 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TBC1D3BA6NDS4 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TBC1D3BA6NDS4 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TBC1D3BA6NDS4 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TBC1D3BA6NDS4 RCN1P2-201ENST00000398357 915 ntBASIC18.45■□□□□ 0.54
TBC1D3BA6NDS4 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TBC1D3BA6NDS4 FAM197Y8-203ENST00000450145 560 ntBASIC18.45■□□□□ 0.54
TBC1D3BA6NDS4 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.45■□□□□ 0.54
TBC1D3BA6NDS4 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.45■□□□□ 0.54
TBC1D3BA6NDS4 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.45■□□□□ 0.54
TBC1D3BA6NDS4 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.45■□□□□ 0.54
TBC1D3BA6NDS4 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
TBC1D3BA6NDS4 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TBC1D3BA6NDS4 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TBC1D3BA6NDS4 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TBC1D3BA6NDS4 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.45■□□□□ 0.54
TBC1D3BA6NDS4 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TBC1D3BA6NDS4 HLA-A-201ENST00000376802 1334 ntBASIC18.45■□□□□ 0.54
TBC1D3BA6NDS4 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TBC1D3BA6NDS4 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
TBC1D3BA6NDS4 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.45■□□□□ 0.54
TBC1D3BA6NDS4 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TBC1D3BA6NDS4 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TBC1D3BA6NDS4 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TBC1D3BA6NDS4 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.44■□□□□ 0.54
TBC1D3BA6NDS4 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms