Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC14.68□□□□□ -0.06
TCRBV4S1A1TA0A5B7 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC14.68□□□□□ -0.06
TCRBV4S1A1TA0A5B7 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TCRBV4S1A1TA0A5B7 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TCRBV4S1A1TA0A5B7 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TCRBV4S1A1TA0A5B7 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
TCRBV4S1A1TA0A5B7 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC14.68□□□□□ -0.06
TCRBV4S1A1TA0A5B7 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TCRBV4S1A1TA0A5B7 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
TCRBV4S1A1TA0A5B7 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TCRBV4S1A1TA0A5B7 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC14.68□□□□□ -0.06
TCRBV4S1A1TA0A5B7 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TCRBV4S1A1TA0A5B7 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC14.68□□□□□ -0.06
TCRBV4S1A1TA0A5B7 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TCRBV4S1A1TA0A5B7 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC14.68□□□□□ -0.06
TCRBV4S1A1TA0A5B7 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC14.68□□□□□ -0.06
TCRBV4S1A1TA0A5B7 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC14.68□□□□□ -0.06
TCRBV4S1A1TA0A5B7 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC14.68□□□□□ -0.06
TCRBV4S1A1TA0A5B7 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC14.68□□□□□ -0.06
TCRBV4S1A1TA0A5B7 CR769767.2-201ENST00000622735 460 ntBASIC14.68□□□□□ -0.06
TCRBV4S1A1TA0A5B7 AL121956.5-201ENST00000625261 221 ntBASIC14.68□□□□□ -0.06
TCRBV4S1A1TA0A5B7 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TCRBV4S1A1TA0A5B7 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC14.68□□□□□ -0.06
TCRBV4S1A1TA0A5B7 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
TCRBV4S1A1TA0A5B7 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC14.68□□□□□ -0.06
TCRBV4S1A1TA0A5B7 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TCRBV4S1A1TA0A5B7 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TCRBV4S1A1TA0A5B7 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TCRBV4S1A1TA0A5B7 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC14.68□□□□□ -0.06
TCRBV4S1A1TA0A5B7 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TCRBV4S1A1TA0A5B7 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TCRBV4S1A1TA0A5B7 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TCRBV4S1A1TA0A5B7 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TCRBV4S1A1TA0A5B7 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
TCRBV4S1A1TA0A5B7 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TCRBV4S1A1TA0A5B7 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TCRBV4S1A1TA0A5B7 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TCRBV4S1A1TA0A5B7 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TCRBV4S1A1TA0A5B7 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TCRBV4S1A1TA0A5B7 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TCRBV4S1A1TA0A5B7 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TCRBV4S1A1TA0A5B7 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TCRBV4S1A1TA0A5B7 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TCRBV4S1A1TA0A5B7 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TCRBV4S1A1TA0A5B7 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
TCRBV4S1A1TA0A5B7 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TCRBV4S1A1TA0A5B7 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TCRBV4S1A1TA0A5B7 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC14.67□□□□□ -0.06
TCRBV4S1A1TA0A5B7 MTMR9LP-203ENST00000426597 1545 ntBASIC14.67□□□□□ -0.06
TCRBV4S1A1TA0A5B7 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TCRBV4S1A1TA0A5B7 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
TCRBV4S1A1TA0A5B7 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TCRBV4S1A1TA0A5B7 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TCRBV4S1A1TA0A5B7 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TCRBV4S1A1TA0A5B7 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC14.67□□□□□ -0.06
TCRBV4S1A1TA0A5B7 SNX5-210ENST00000481323 562 ntTSL 3 BASIC14.67□□□□□ -0.06
TCRBV4S1A1TA0A5B7 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC14.67□□□□□ -0.06
TCRBV4S1A1TA0A5B7 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC14.67□□□□□ -0.06
TCRBV4S1A1TA0A5B7 GCSHP2-201ENST00000560971 527 ntBASIC14.67□□□□□ -0.06
TCRBV4S1A1TA0A5B7 MIR4674-201ENST00000582457 87 ntBASIC14.67□□□□□ -0.06
TCRBV4S1A1TA0A5B7 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
TCRBV4S1A1TA0A5B7 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
TCRBV4S1A1TA0A5B7 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
TCRBV4S1A1TA0A5B7 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC14.67□□□□□ -0.06
TCRBV4S1A1TA0A5B7 AC008622.2-201ENST00000617006 1229 ntBASIC14.67□□□□□ -0.06
TCRBV4S1A1TA0A5B7 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
TCRBV4S1A1TA0A5B7 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
TCRBV4S1A1TA0A5B7 AC068587.9-201ENST00000641814 219 ntBASIC14.67□□□□□ -0.06
TCRBV4S1A1TA0A5B7 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TCRBV4S1A1TA0A5B7 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC14.67□□□□□ -0.06
TCRBV4S1A1TA0A5B7 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC14.67□□□□□ -0.06
TCRBV4S1A1TA0A5B7 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
TCRBV4S1A1TA0A5B7 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TCRBV4S1A1TA0A5B7 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TCRBV4S1A1TA0A5B7 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TCRBV4S1A1TA0A5B7 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TCRBV4S1A1TA0A5B7 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TCRBV4S1A1TA0A5B7 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC14.67□□□□□ -0.06
TCRBV4S1A1TA0A5B7 NFYC-AS1-201ENST00000606277 1687 ntBASIC14.67□□□□□ -0.06
TCRBV4S1A1TA0A5B7 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC14.67□□□□□ -0.06
TCRBV4S1A1TA0A5B7 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TCRBV4S1A1TA0A5B7 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TCRBV4S1A1TA0A5B7 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TCRBV4S1A1TA0A5B7 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TCRBV4S1A1TA0A5B7 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TCRBV4S1A1TA0A5B7 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
TCRBV4S1A1TA0A5B7 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC14.66□□□□□ -0.06
TCRBV4S1A1TA0A5B7 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC14.66□□□□□ -0.06
TCRBV4S1A1TA0A5B7 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC14.66□□□□□ -0.06
TCRBV4S1A1TA0A5B7 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC14.66□□□□□ -0.06
TCRBV4S1A1TA0A5B7 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC14.66□□□□□ -0.06
TCRBV4S1A1TA0A5B7 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC14.66□□□□□ -0.06
TCRBV4S1A1TA0A5B7 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TCRBV4S1A1TA0A5B7 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TCRBV4S1A1TA0A5B7 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TCRBV4S1A1TA0A5B7 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TCRBV4S1A1TA0A5B7 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TCRBV4S1A1TA0A5B7 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TCRBV4S1A1TA0A5B7 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
TCRBV4S1A1TA0A5B7 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms