Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
TRAV5A0A0B4J249 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
TRAV5A0A0B4J249 AP002982.1-201ENST00000492365 877 ntBASIC14.2□□□□□ -0.14
TRAV5A0A0B4J249 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC14.2□□□□□ -0.14
TRAV5A0A0B4J249 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV5A0A0B4J249 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC14.2□□□□□ -0.14
TRAV5A0A0B4J249 AC124016.1-201ENST00000609552 612 ntBASIC14.2□□□□□ -0.14
TRAV5A0A0B4J249 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV5A0A0B4J249 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV5A0A0B4J249 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
TRAV5A0A0B4J249 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
TRAV5A0A0B4J249 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
TRAV5A0A0B4J249 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV5A0A0B4J249 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV5A0A0B4J249 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV5A0A0B4J249 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV5A0A0B4J249 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV5A0A0B4J249 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV5A0A0B4J249 HLA-DQB1-201ENST00000374943 1656 ntBASIC14.2□□□□□ -0.14
TRAV5A0A0B4J249 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV5A0A0B4J249 NME9-203ENST00000383180 2133 ntTSL 2 BASIC14.2□□□□□ -0.14
TRAV5A0A0B4J249 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
TRAV5A0A0B4J249 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV5A0A0B4J249 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
TRAV5A0A0B4J249 AC141586.5-201ENST00000624546 2050 ntBASIC14.19□□□□□ -0.14
TRAV5A0A0B4J249 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV5A0A0B4J249 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV5A0A0B4J249 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC14.19□□□□□ -0.14
TRAV5A0A0B4J249 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
TRAV5A0A0B4J249 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC14.19□□□□□ -0.14
TRAV5A0A0B4J249 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC14.19□□□□□ -0.14
TRAV5A0A0B4J249 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV5A0A0B4J249 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
TRAV5A0A0B4J249 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV5A0A0B4J249 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV5A0A0B4J249 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV5A0A0B4J249 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC14.19□□□□□ -0.14
TRAV5A0A0B4J249 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV5A0A0B4J249 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
TRAV5A0A0B4J249 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV5A0A0B4J249 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC14.19□□□□□ -0.14
TRAV5A0A0B4J249 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV5A0A0B4J249 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV5A0A0B4J249 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV5A0A0B4J249 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV5A0A0B4J249 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV5A0A0B4J249 AL355802.2-201ENST00000402069 882 ntBASIC14.19□□□□□ -0.14
TRAV5A0A0B4J249 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV5A0A0B4J249 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC14.19□□□□□ -0.14
TRAV5A0A0B4J249 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
TRAV5A0A0B4J249 AC110285.5-201ENST00000611501 352 ntBASIC14.19□□□□□ -0.14
TRAV5A0A0B4J249 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
TRAV5A0A0B4J249 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
TRAV5A0A0B4J249 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV5A0A0B4J249 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV5A0A0B4J249 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV5A0A0B4J249 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV5A0A0B4J249 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
TRAV5A0A0B4J249 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
TRAV5A0A0B4J249 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC14.19□□□□□ -0.14
TRAV5A0A0B4J249 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV5A0A0B4J249 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV5A0A0B4J249 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV5A0A0B4J249 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV5A0A0B4J249 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV5A0A0B4J249 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV5A0A0B4J249 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV5A0A0B4J249 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV5A0A0B4J249 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC14.18□□□□□ -0.14
TRAV5A0A0B4J249 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV5A0A0B4J249 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV5A0A0B4J249 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV5A0A0B4J249 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV5A0A0B4J249 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV5A0A0B4J249 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV5A0A0B4J249 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV5A0A0B4J249 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV5A0A0B4J249 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV5A0A0B4J249 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
TRAV5A0A0B4J249 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC14.18□□□□□ -0.14
TRAV5A0A0B4J249 MIR564-202ENST00000385049 94 ntBASIC14.18□□□□□ -0.14
TRAV5A0A0B4J249 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV5A0A0B4J249 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC14.18□□□□□ -0.14
TRAV5A0A0B4J249 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
TRAV5A0A0B4J249 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC14.18□□□□□ -0.14
TRAV5A0A0B4J249 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC14.18□□□□□ -0.14
TRAV5A0A0B4J249 CR392000.1-201ENST00000624770 1228 ntBASIC14.18□□□□□ -0.14
TRAV5A0A0B4J249 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV5A0A0B4J249 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV5A0A0B4J249 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV5A0A0B4J249 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV5A0A0B4J249 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
TRAV5A0A0B4J249 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
TRAV5A0A0B4J249 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV5A0A0B4J249 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV5A0A0B4J249 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC14.18□□□□□ -0.14
TRAV5A0A0B4J249 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV5A0A0B4J249 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC14.18□□□□□ -0.14
TRAV5A0A0B4J249 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV5A0A0B4J249 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms