Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
DDX49Q9Y6V7 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC21.91■■□□□ 1.1
DDX49Q9Y6V7 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC21.91■■□□□ 1.1
DDX49Q9Y6V7 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
DDX49Q9Y6V7 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
DDX49Q9Y6V7 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
DDX49Q9Y6V7 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC21.91■■□□□ 1.1
DDX49Q9Y6V7 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC21.91■■□□□ 1.1
DDX49Q9Y6V7 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
DDX49Q9Y6V7 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC21.91■■□□□ 1.1
DDX49Q9Y6V7 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
DDX49Q9Y6V7 AC022616.7-201ENST00000525383 220 ntBASIC21.91■■□□□ 1.1
DDX49Q9Y6V7 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC21.91■■□□□ 1.1
DDX49Q9Y6V7 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
DDX49Q9Y6V7 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC21.91■■□□□ 1.1
DDX49Q9Y6V7 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
DDX49Q9Y6V7 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
DDX49Q9Y6V7 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
DDX49Q9Y6V7 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
DDX49Q9Y6V7 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC21.91■■□□□ 1.1
DDX49Q9Y6V7 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
DDX49Q9Y6V7 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
DDX49Q9Y6V7 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
DDX49Q9Y6V7 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
DDX49Q9Y6V7 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
DDX49Q9Y6V7 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
DDX49Q9Y6V7 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC21.9■■□□□ 1.1
DDX49Q9Y6V7 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
DDX49Q9Y6V7 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
DDX49Q9Y6V7 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
DDX49Q9Y6V7 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC21.9■■□□□ 1.1
DDX49Q9Y6V7 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC21.9■■□□□ 1.1
DDX49Q9Y6V7 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
DDX49Q9Y6V7 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
DDX49Q9Y6V7 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
DDX49Q9Y6V7 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
DDX49Q9Y6V7 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
DDX49Q9Y6V7 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
DDX49Q9Y6V7 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
DDX49Q9Y6V7 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
DDX49Q9Y6V7 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC21.9■■□□□ 1.1
DDX49Q9Y6V7 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC21.9■■□□□ 1.1
DDX49Q9Y6V7 BX664615.1-201ENST00000443558 458 ntBASIC21.9■■□□□ 1.1
DDX49Q9Y6V7 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
DDX49Q9Y6V7 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
DDX49Q9Y6V7 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
DDX49Q9Y6V7 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
DDX49Q9Y6V7 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
DDX49Q9Y6V7 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC21.9■■□□□ 1.1
DDX49Q9Y6V7 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
DDX49Q9Y6V7 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
DDX49Q9Y6V7 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC21.89■■□□□ 1.1
DDX49Q9Y6V7 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC21.89■■□□□ 1.1
DDX49Q9Y6V7 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC21.89■■□□□ 1.09
DDX49Q9Y6V7 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
DDX49Q9Y6V7 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
DDX49Q9Y6V7 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC21.89■■□□□ 1.09
DDX49Q9Y6V7 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
DDX49Q9Y6V7 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
DDX49Q9Y6V7 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
DDX49Q9Y6V7 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
DDX49Q9Y6V7 NME1-207ENST00000480143 964 ntTSL 2 BASIC21.89■■□□□ 1.09
DDX49Q9Y6V7 YBX1P2-201ENST00000489612 999 ntBASIC21.89■■□□□ 1.09
DDX49Q9Y6V7 AC063952.2-201ENST00000498792 1227 ntBASIC21.89■■□□□ 1.09
DDX49Q9Y6V7 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC21.89■■□□□ 1.09
DDX49Q9Y6V7 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC21.89■■□□□ 1.09
DDX49Q9Y6V7 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
DDX49Q9Y6V7 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC21.89■■□□□ 1.09
DDX49Q9Y6V7 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
DDX49Q9Y6V7 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
DDX49Q9Y6V7 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
DDX49Q9Y6V7 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
DDX49Q9Y6V7 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
DDX49Q9Y6V7 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
DDX49Q9Y6V7 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
DDX49Q9Y6V7 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
DDX49Q9Y6V7 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
DDX49Q9Y6V7 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
DDX49Q9Y6V7 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC21.88■■□□□ 1.09
DDX49Q9Y6V7 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
DDX49Q9Y6V7 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
DDX49Q9Y6V7 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
DDX49Q9Y6V7 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC21.88■■□□□ 1.09
DDX49Q9Y6V7 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
DDX49Q9Y6V7 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
DDX49Q9Y6V7 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC21.88■■□□□ 1.09
DDX49Q9Y6V7 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC21.88■■□□□ 1.09
DDX49Q9Y6V7 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
DDX49Q9Y6V7 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC21.88■■□□□ 1.09
DDX49Q9Y6V7 SLC25A1P2-201ENST00000430693 912 ntBASIC21.88■■□□□ 1.09
DDX49Q9Y6V7 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC21.88■■□□□ 1.09
DDX49Q9Y6V7 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC21.88■■□□□ 1.09
DDX49Q9Y6V7 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
DDX49Q9Y6V7 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
DDX49Q9Y6V7 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
DDX49Q9Y6V7 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
DDX49Q9Y6V7 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
DDX49Q9Y6V7 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
DDX49Q9Y6V7 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
DDX49Q9Y6V7 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms