Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SPCS1Q9Y6A9 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
SPCS1Q9Y6A9 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC12.5□□□□□ -0.41
SPCS1Q9Y6A9 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
SPCS1Q9Y6A9 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
SPCS1Q9Y6A9 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SPCS1Q9Y6A9 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SPCS1Q9Y6A9 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SPCS1Q9Y6A9 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SPCS1Q9Y6A9 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SPCS1Q9Y6A9 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SPCS1Q9Y6A9 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SPCS1Q9Y6A9 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC12.49□□□□□ -0.41
SPCS1Q9Y6A9 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SPCS1Q9Y6A9 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
SPCS1Q9Y6A9 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC12.49□□□□□ -0.41
SPCS1Q9Y6A9 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC12.49□□□□□ -0.41
SPCS1Q9Y6A9 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SPCS1Q9Y6A9 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC12.49□□□□□ -0.41
SPCS1Q9Y6A9 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SPCS1Q9Y6A9 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SPCS1Q9Y6A9 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SPCS1Q9Y6A9 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SPCS1Q9Y6A9 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SPCS1Q9Y6A9 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SPCS1Q9Y6A9 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SPCS1Q9Y6A9 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SPCS1Q9Y6A9 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
SPCS1Q9Y6A9 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC12.49□□□□□ -0.41
SPCS1Q9Y6A9 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
SPCS1Q9Y6A9 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
SPCS1Q9Y6A9 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SPCS1Q9Y6A9 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SPCS1Q9Y6A9 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SPCS1Q9Y6A9 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SPCS1Q9Y6A9 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SPCS1Q9Y6A9 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
SPCS1Q9Y6A9 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC12.49□□□□□ -0.41
SPCS1Q9Y6A9 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SPCS1Q9Y6A9 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SPCS1Q9Y6A9 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SPCS1Q9Y6A9 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SPCS1Q9Y6A9 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
SPCS1Q9Y6A9 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SPCS1Q9Y6A9 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SPCS1Q9Y6A9 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SPCS1Q9Y6A9 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SPCS1Q9Y6A9 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SPCS1Q9Y6A9 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SPCS1Q9Y6A9 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SPCS1Q9Y6A9 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SPCS1Q9Y6A9 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SPCS1Q9Y6A9 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC12.48□□□□□ -0.41
SPCS1Q9Y6A9 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC12.48□□□□□ -0.41
SPCS1Q9Y6A9 AC093677.2-201ENST00000600169 1863 ntBASIC12.48□□□□□ -0.41
SPCS1Q9Y6A9 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC12.48□□□□□ -0.41
SPCS1Q9Y6A9 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SPCS1Q9Y6A9 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
SPCS1Q9Y6A9 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SPCS1Q9Y6A9 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
SPCS1Q9Y6A9 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
SPCS1Q9Y6A9 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
SPCS1Q9Y6A9 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SPCS1Q9Y6A9 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SPCS1Q9Y6A9 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SPCS1Q9Y6A9 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
SPCS1Q9Y6A9 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC12.48□□□□□ -0.41
SPCS1Q9Y6A9 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SPCS1Q9Y6A9 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC12.48□□□□□ -0.41
SPCS1Q9Y6A9 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SPCS1Q9Y6A9 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC12.48□□□□□ -0.41
SPCS1Q9Y6A9 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC12.48□□□□□ -0.41
SPCS1Q9Y6A9 MLEC-202ENST00000412616 841 ntTSL 3 BASIC12.48□□□□□ -0.41
SPCS1Q9Y6A9 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
SPCS1Q9Y6A9 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SPCS1Q9Y6A9 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC12.48□□□□□ -0.41
SPCS1Q9Y6A9 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC12.48□□□□□ -0.41
SPCS1Q9Y6A9 HGH1-207ENST00000628266 258 ntTSL 5 BASIC12.48□□□□□ -0.41
SPCS1Q9Y6A9 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SPCS1Q9Y6A9 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SPCS1Q9Y6A9 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC12.48□□□□□ -0.41
SPCS1Q9Y6A9 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SPCS1Q9Y6A9 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC12.48□□□□□ -0.41
SPCS1Q9Y6A9 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SPCS1Q9Y6A9 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SPCS1Q9Y6A9 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SPCS1Q9Y6A9 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SPCS1Q9Y6A9 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
SPCS1Q9Y6A9 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SPCS1Q9Y6A9 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SPCS1Q9Y6A9 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SPCS1Q9Y6A9 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SPCS1Q9Y6A9 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SPCS1Q9Y6A9 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SPCS1Q9Y6A9 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SPCS1Q9Y6A9 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SPCS1Q9Y6A9 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SPCS1Q9Y6A9 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
SPCS1Q9Y6A9 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SPCS1Q9Y6A9 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms