Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLIC4Q9Y696 GNAS-203ENST00000306120 1878 ntBASIC20.84■□□□□ 0.93
CLIC4Q9Y696 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC20.84■□□□□ 0.93
CLIC4Q9Y696 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC20.83■□□□□ 0.93
CLIC4Q9Y696 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC20.83■□□□□ 0.93
CLIC4Q9Y696 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC20.83■□□□□ 0.93
CLIC4Q9Y696 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLIC4Q9Y696 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.83■□□□□ 0.93
CLIC4Q9Y696 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLIC4Q9Y696 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLIC4Q9Y696 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CLIC4Q9Y696 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
CLIC4Q9Y696 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLIC4Q9Y696 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
CLIC4Q9Y696 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CLIC4Q9Y696 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CLIC4Q9Y696 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.83■□□□□ 0.93
CLIC4Q9Y696 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.83■□□□□ 0.93
CLIC4Q9Y696 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.83■□□□□ 0.93
CLIC4Q9Y696 AC093827.2-201ENST00000512654 315 ntBASIC20.83■□□□□ 0.93
CLIC4Q9Y696 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.83■□□□□ 0.93
CLIC4Q9Y696 MIR3180-4-201ENST00000582223 153 ntBASIC20.83■□□□□ 0.93
CLIC4Q9Y696 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.83■□□□□ 0.93
CLIC4Q9Y696 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CLIC4Q9Y696 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CLIC4Q9Y696 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLIC4Q9Y696 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CLIC4Q9Y696 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CLIC4Q9Y696 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CLIC4Q9Y696 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CLIC4Q9Y696 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLIC4Q9Y696 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
CLIC4Q9Y696 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CLIC4Q9Y696 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CLIC4Q9Y696 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CLIC4Q9Y696 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLIC4Q9Y696 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CLIC4Q9Y696 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLIC4Q9Y696 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLIC4Q9Y696 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC20.82■□□□□ 0.92
CLIC4Q9Y696 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLIC4Q9Y696 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLIC4Q9Y696 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLIC4Q9Y696 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CLIC4Q9Y696 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLIC4Q9Y696 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CLIC4Q9Y696 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CLIC4Q9Y696 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLIC4Q9Y696 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
CLIC4Q9Y696 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLIC4Q9Y696 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CLIC4Q9Y696 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLIC4Q9Y696 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLIC4Q9Y696 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC20.82■□□□□ 0.92
CLIC4Q9Y696 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC20.82■□□□□ 0.92
CLIC4Q9Y696 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLIC4Q9Y696 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CLIC4Q9Y696 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLIC4Q9Y696 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLIC4Q9Y696 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CLIC4Q9Y696 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CLIC4Q9Y696 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLIC4Q9Y696 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLIC4Q9Y696 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CLIC4Q9Y696 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLIC4Q9Y696 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC20.81■□□□□ 0.92
CLIC4Q9Y696 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLIC4Q9Y696 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CLIC4Q9Y696 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC20.81■□□□□ 0.92
CLIC4Q9Y696 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLIC4Q9Y696 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLIC4Q9Y696 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLIC4Q9Y696 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CLIC4Q9Y696 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLIC4Q9Y696 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLIC4Q9Y696 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLIC4Q9Y696 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC20.81■□□□□ 0.92
CLIC4Q9Y696 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC20.81■□□□□ 0.92
CLIC4Q9Y696 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLIC4Q9Y696 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLIC4Q9Y696 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC20.81■□□□□ 0.92
CLIC4Q9Y696 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLIC4Q9Y696 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC20.81■□□□□ 0.92
CLIC4Q9Y696 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
CLIC4Q9Y696 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
CLIC4Q9Y696 FZD10-202ENST00000539839 3282 ntBASIC20.81■□□□□ 0.92
CLIC4Q9Y696 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLIC4Q9Y696 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CLIC4Q9Y696 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC20.81■□□□□ 0.92
CLIC4Q9Y696 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
CLIC4Q9Y696 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLIC4Q9Y696 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLIC4Q9Y696 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CLIC4Q9Y696 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC20.8■□□□□ 0.92
CLIC4Q9Y696 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CLIC4Q9Y696 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
CLIC4Q9Y696 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLIC4Q9Y696 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CLIC4Q9Y696 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLIC4Q9Y696 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms