Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL4A3BPQ9Y5P4 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
COL4A3BPQ9Y5P4 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
COL4A3BPQ9Y5P4 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL4A3BPQ9Y5P4 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL4A3BPQ9Y5P4 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL4A3BPQ9Y5P4 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.41■□□□□ 0.86
COL4A3BPQ9Y5P4 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL4A3BPQ9Y5P4 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL4A3BPQ9Y5P4 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL4A3BPQ9Y5P4 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL4A3BPQ9Y5P4 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COL4A3BPQ9Y5P4 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC20.41■□□□□ 0.86
COL4A3BPQ9Y5P4 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COL4A3BPQ9Y5P4 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC20.41■□□□□ 0.86
COL4A3BPQ9Y5P4 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC20.41■□□□□ 0.86
COL4A3BPQ9Y5P4 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC20.41■□□□□ 0.86
COL4A3BPQ9Y5P4 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC20.41■□□□□ 0.86
COL4A3BPQ9Y5P4 SPEG-225ENST00000617028 815 ntTSL 5 BASIC20.41■□□□□ 0.86
COL4A3BPQ9Y5P4 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
COL4A3BPQ9Y5P4 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.41■□□□□ 0.86
COL4A3BPQ9Y5P4 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL4A3BPQ9Y5P4 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
COL4A3BPQ9Y5P4 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COL4A3BPQ9Y5P4 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COL4A3BPQ9Y5P4 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
COL4A3BPQ9Y5P4 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL4A3BPQ9Y5P4 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL4A3BPQ9Y5P4 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL4A3BPQ9Y5P4 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
COL4A3BPQ9Y5P4 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.41■□□□□ 0.86
COL4A3BPQ9Y5P4 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COL4A3BPQ9Y5P4 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL4A3BPQ9Y5P4 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.4■□□□□ 0.86
COL4A3BPQ9Y5P4 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL4A3BPQ9Y5P4 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
COL4A3BPQ9Y5P4 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL4A3BPQ9Y5P4 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL4A3BPQ9Y5P4 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
COL4A3BPQ9Y5P4 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
COL4A3BPQ9Y5P4 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC20.4■□□□□ 0.86
COL4A3BPQ9Y5P4 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
COL4A3BPQ9Y5P4 PVRIG2P-201ENST00000435460 978 ntBASIC20.4■□□□□ 0.86
COL4A3BPQ9Y5P4 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
COL4A3BPQ9Y5P4 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL4A3BPQ9Y5P4 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.4■□□□□ 0.86
COL4A3BPQ9Y5P4 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.4■□□□□ 0.86
COL4A3BPQ9Y5P4 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL4A3BPQ9Y5P4 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.4■□□□□ 0.86
COL4A3BPQ9Y5P4 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
COL4A3BPQ9Y5P4 AC069148.1-201ENST00000608741 768 ntBASIC20.4■□□□□ 0.86
COL4A3BPQ9Y5P4 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL4A3BPQ9Y5P4 AC093458.2-201ENST00000623150 629 ntBASIC20.4■□□□□ 0.86
COL4A3BPQ9Y5P4 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL4A3BPQ9Y5P4 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
COL4A3BPQ9Y5P4 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC20.39■□□□□ 0.86
COL4A3BPQ9Y5P4 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.86
COL4A3BPQ9Y5P4 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
COL4A3BPQ9Y5P4 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
COL4A3BPQ9Y5P4 SDHAP2-201ENST00000455183 2001 ntBASIC20.39■□□□□ 0.86
COL4A3BPQ9Y5P4 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC20.39■□□□□ 0.86
COL4A3BPQ9Y5P4 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
COL4A3BPQ9Y5P4 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.39■□□□□ 0.85
COL4A3BPQ9Y5P4 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
COL4A3BPQ9Y5P4 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
COL4A3BPQ9Y5P4 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COL4A3BPQ9Y5P4 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
COL4A3BPQ9Y5P4 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COL4A3BPQ9Y5P4 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COL4A3BPQ9Y5P4 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC20.39■□□□□ 0.85
COL4A3BPQ9Y5P4 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC20.39■□□□□ 0.85
COL4A3BPQ9Y5P4 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC20.39■□□□□ 0.85
COL4A3BPQ9Y5P4 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
COL4A3BPQ9Y5P4 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
COL4A3BPQ9Y5P4 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COL4A3BPQ9Y5P4 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
COL4A3BPQ9Y5P4 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COL4A3BPQ9Y5P4 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
COL4A3BPQ9Y5P4 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
COL4A3BPQ9Y5P4 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
COL4A3BPQ9Y5P4 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.38■□□□□ 0.85
COL4A3BPQ9Y5P4 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COL4A3BPQ9Y5P4 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.38■□□□□ 0.85
COL4A3BPQ9Y5P4 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
COL4A3BPQ9Y5P4 AL162741.1-201ENST00000565563 1558 ntBASIC20.38■□□□□ 0.85
COL4A3BPQ9Y5P4 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COL4A3BPQ9Y5P4 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC20.38■□□□□ 0.85
COL4A3BPQ9Y5P4 PBK-203ENST00000522944 1499 ntTSL 2 BASIC20.38■□□□□ 0.85
COL4A3BPQ9Y5P4 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
COL4A3BPQ9Y5P4 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COL4A3BPQ9Y5P4 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
COL4A3BPQ9Y5P4 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
COL4A3BPQ9Y5P4 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC20.38■□□□□ 0.85
COL4A3BPQ9Y5P4 MIR662-201ENST00000384847 95 ntBASIC20.38■□□□□ 0.85
COL4A3BPQ9Y5P4 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
COL4A3BPQ9Y5P4 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC20.38■□□□□ 0.85
COL4A3BPQ9Y5P4 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC20.38■□□□□ 0.85
COL4A3BPQ9Y5P4 METTL23-204ENST00000586752 904 ntTSL 2 BASIC20.38■□□□□ 0.85
COL4A3BPQ9Y5P4 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
COL4A3BPQ9Y5P4 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms