Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
PCDHGA4Q9Y5G9 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.05■□□□□ 0.48
PCDHGA4Q9Y5G9 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA4Q9Y5G9 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA4Q9Y5G9 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA4Q9Y5G9 AL512353.2-201ENST00000448759 1962 ntBASIC18.04■□□□□ 0.48
PCDHGA4Q9Y5G9 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDHGA4Q9Y5G9 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA4Q9Y5G9 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA4Q9Y5G9 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA4Q9Y5G9 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA4Q9Y5G9 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.04■□□□□ 0.48
PCDHGA4Q9Y5G9 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDHGA4Q9Y5G9 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDHGA4Q9Y5G9 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDHGA4Q9Y5G9 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA4Q9Y5G9 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA4Q9Y5G9 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA4Q9Y5G9 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA4Q9Y5G9 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA4Q9Y5G9 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.04■□□□□ 0.48
PCDHGA4Q9Y5G9 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.04■□□□□ 0.48
PCDHGA4Q9Y5G9 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA4Q9Y5G9 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA4Q9Y5G9 AL136038.3-201ENST00000561909 1096 ntBASIC18.04■□□□□ 0.48
PCDHGA4Q9Y5G9 AC026790.2-201ENST00000606282 430 ntBASIC18.04■□□□□ 0.48
PCDHGA4Q9Y5G9 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.04■□□□□ 0.48
PCDHGA4Q9Y5G9 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
PCDHGA4Q9Y5G9 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA4Q9Y5G9 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
PCDHGA4Q9Y5G9 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA4Q9Y5G9 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
PCDHGA4Q9Y5G9 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA4Q9Y5G9 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA4Q9Y5G9 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.04■□□□□ 0.48
PCDHGA4Q9Y5G9 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA4Q9Y5G9 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA4Q9Y5G9 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA4Q9Y5G9 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA4Q9Y5G9 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA4Q9Y5G9 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDHGA4Q9Y5G9 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGA4Q9Y5G9 AC006333.2-201ENST00000607957 2099 ntBASIC18.03■□□□□ 0.48
PCDHGA4Q9Y5G9 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
PCDHGA4Q9Y5G9 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.03■□□□□ 0.48
PCDHGA4Q9Y5G9 KRT8P32-201ENST00000512863 1461 ntBASIC18.03■□□□□ 0.48
PCDHGA4Q9Y5G9 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHGA4Q9Y5G9 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGA4Q9Y5G9 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.03■□□□□ 0.48
PCDHGA4Q9Y5G9 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.03■□□□□ 0.48
PCDHGA4Q9Y5G9 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHGA4Q9Y5G9 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.03■□□□□ 0.48
PCDHGA4Q9Y5G9 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGA4Q9Y5G9 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.03■□□□□ 0.48
PCDHGA4Q9Y5G9 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGA4Q9Y5G9 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.03■□□□□ 0.48
PCDHGA4Q9Y5G9 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
PCDHGA4Q9Y5G9 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGA4Q9Y5G9 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
PCDHGA4Q9Y5G9 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGA4Q9Y5G9 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGA4Q9Y5G9 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.03■□□□□ 0.48
PCDHGA4Q9Y5G9 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
PCDHGA4Q9Y5G9 AC093503.3-201ENST00000624917 2352 ntBASIC18.03■□□□□ 0.48
PCDHGA4Q9Y5G9 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGA4Q9Y5G9 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGA4Q9Y5G9 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGA4Q9Y5G9 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGA4Q9Y5G9 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGA4Q9Y5G9 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
PCDHGA4Q9Y5G9 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGA4Q9Y5G9 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
PCDHGA4Q9Y5G9 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGA4Q9Y5G9 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGA4Q9Y5G9 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGA4Q9Y5G9 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.02■□□□□ 0.48
PCDHGA4Q9Y5G9 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGA4Q9Y5G9 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
PCDHGA4Q9Y5G9 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGA4Q9Y5G9 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGA4Q9Y5G9 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGA4Q9Y5G9 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGA4Q9Y5G9 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
PCDHGA4Q9Y5G9 AP000523.1-201ENST00000398242 1049 ntBASIC18.02■□□□□ 0.48
PCDHGA4Q9Y5G9 KRT8P45-201ENST00000414328 1447 ntBASIC18.02■□□□□ 0.48
PCDHGA4Q9Y5G9 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGA4Q9Y5G9 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.02■□□□□ 0.48
PCDHGA4Q9Y5G9 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.02■□□□□ 0.48
PCDHGA4Q9Y5G9 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC18.02■□□□□ 0.48
PCDHGA4Q9Y5G9 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGA4Q9Y5G9 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
PCDHGA4Q9Y5G9 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.02■□□□□ 0.48
PCDHGA4Q9Y5G9 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.02■□□□□ 0.48
PCDHGA4Q9Y5G9 AC083906.6-201ENST00000641366 219 ntBASIC18.02■□□□□ 0.48
PCDHGA4Q9Y5G9 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PCDHGA4Q9Y5G9 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PCDHGA4Q9Y5G9 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.02■□□□□ 0.47
PCDHGA4Q9Y5G9 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PCDHGA4Q9Y5G9 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PCDHGA4Q9Y5G9 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms