Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGB1Q9Y5G3 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGB1Q9Y5G3 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
PCDHGB1Q9Y5G3 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.74■□□□□ 0.27
PCDHGB1Q9Y5G3 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
PCDHGB1Q9Y5G3 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
PCDHGB1Q9Y5G3 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGB1Q9Y5G3 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC16.73■□□□□ 0.27
PCDHGB1Q9Y5G3 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGB1Q9Y5G3 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.73■□□□□ 0.27
PCDHGB1Q9Y5G3 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGB1Q9Y5G3 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
PCDHGB1Q9Y5G3 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGB1Q9Y5G3 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC16.73■□□□□ 0.27
PCDHGB1Q9Y5G3 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC16.73■□□□□ 0.27
PCDHGB1Q9Y5G3 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC16.73■□□□□ 0.27
PCDHGB1Q9Y5G3 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGB1Q9Y5G3 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGB1Q9Y5G3 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
PCDHGB1Q9Y5G3 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.73■□□□□ 0.27
PCDHGB1Q9Y5G3 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.73■□□□□ 0.27
PCDHGB1Q9Y5G3 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
PCDHGB1Q9Y5G3 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGB1Q9Y5G3 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGB1Q9Y5G3 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
PCDHGB1Q9Y5G3 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGB1Q9Y5G3 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
PCDHGB1Q9Y5G3 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGB1Q9Y5G3 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
PCDHGB1Q9Y5G3 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB1Q9Y5G3 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
PCDHGB1Q9Y5G3 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB1Q9Y5G3 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB1Q9Y5G3 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC16.72■□□□□ 0.27
PCDHGB1Q9Y5G3 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB1Q9Y5G3 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB1Q9Y5G3 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
PCDHGB1Q9Y5G3 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB1Q9Y5G3 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.72■□□□□ 0.27
PCDHGB1Q9Y5G3 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB1Q9Y5G3 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.72■□□□□ 0.27
PCDHGB1Q9Y5G3 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.72■□□□□ 0.27
PCDHGB1Q9Y5G3 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB1Q9Y5G3 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB1Q9Y5G3 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.72■□□□□ 0.27
PCDHGB1Q9Y5G3 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB1Q9Y5G3 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC16.72■□□□□ 0.27
PCDHGB1Q9Y5G3 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC16.72■□□□□ 0.27
PCDHGB1Q9Y5G3 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC16.72■□□□□ 0.27
PCDHGB1Q9Y5G3 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.72■□□□□ 0.27
PCDHGB1Q9Y5G3 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC16.72■□□□□ 0.27
PCDHGB1Q9Y5G3 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB1Q9Y5G3 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC16.72■□□□□ 0.27
PCDHGB1Q9Y5G3 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC16.72■□□□□ 0.27
PCDHGB1Q9Y5G3 AC083880.1-201ENST00000608266 535 ntBASIC16.72■□□□□ 0.27
PCDHGB1Q9Y5G3 AC004264.1-201ENST00000608354 794 ntBASIC16.72■□□□□ 0.27
PCDHGB1Q9Y5G3 MYC-209ENST00000641252 345 ntBASIC16.72■□□□□ 0.27
PCDHGB1Q9Y5G3 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.72■□□□□ 0.27
PCDHGB1Q9Y5G3 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB1Q9Y5G3 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB1Q9Y5G3 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB1Q9Y5G3 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB1Q9Y5G3 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB1Q9Y5G3 KRT8P32-201ENST00000512863 1461 ntBASIC16.72■□□□□ 0.27
PCDHGB1Q9Y5G3 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB1Q9Y5G3 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.72■□□□□ 0.27
PCDHGB1Q9Y5G3 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB1Q9Y5G3 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB1Q9Y5G3 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGB1Q9Y5G3 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGB1Q9Y5G3 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.71■□□□□ 0.27
PCDHGB1Q9Y5G3 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGB1Q9Y5G3 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.71■□□□□ 0.27
PCDHGB1Q9Y5G3 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.71■□□□□ 0.27
PCDHGB1Q9Y5G3 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGB1Q9Y5G3 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGB1Q9Y5G3 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGB1Q9Y5G3 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGB1Q9Y5G3 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGB1Q9Y5G3 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC16.71■□□□□ 0.27
PCDHGB1Q9Y5G3 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGB1Q9Y5G3 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGB1Q9Y5G3 C1QL1P1-201ENST00000568105 661 ntBASIC16.71■□□□□ 0.27
PCDHGB1Q9Y5G3 SOX15-203ENST00000570788 1093 ntBASIC16.71■□□□□ 0.27
PCDHGB1Q9Y5G3 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC16.71■□□□□ 0.27
PCDHGB1Q9Y5G3 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.71■□□□□ 0.27
PCDHGB1Q9Y5G3 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC16.71■□□□□ 0.27
PCDHGB1Q9Y5G3 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGB1Q9Y5G3 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGB1Q9Y5G3 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGB1Q9Y5G3 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGB1Q9Y5G3 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGB1Q9Y5G3 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
PCDHGB1Q9Y5G3 AC018695.7-201ENST00000624587 2492 ntBASIC16.71■□□□□ 0.26
PCDHGB1Q9Y5G3 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.71■□□□□ 0.26
PCDHGB1Q9Y5G3 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB1Q9Y5G3 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB1Q9Y5G3 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
PCDHGB1Q9Y5G3 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.7■□□□□ 0.26
PCDHGB1Q9Y5G3 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms