Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00588Q9Y4M8 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC12.48□□□□□ -0.41
LINC00588Q9Y4M8 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00588Q9Y4M8 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00588Q9Y4M8 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00588Q9Y4M8 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC12.48□□□□□ -0.41
LINC00588Q9Y4M8 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00588Q9Y4M8 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00588Q9Y4M8 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00588Q9Y4M8 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00588Q9Y4M8 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00588Q9Y4M8 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00588Q9Y4M8 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC12.47□□□□□ -0.41
LINC00588Q9Y4M8 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00588Q9Y4M8 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00588Q9Y4M8 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC12.47□□□□□ -0.41
LINC00588Q9Y4M8 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
LINC00588Q9Y4M8 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
LINC00588Q9Y4M8 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00588Q9Y4M8 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00588Q9Y4M8 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00588Q9Y4M8 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00588Q9Y4M8 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
LINC00588Q9Y4M8 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC12.47□□□□□ -0.41
LINC00588Q9Y4M8 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC12.47□□□□□ -0.41
LINC00588Q9Y4M8 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC12.47□□□□□ -0.41
LINC00588Q9Y4M8 TPM4P1-201ENST00000436100 807 ntBASIC12.47□□□□□ -0.41
LINC00588Q9Y4M8 KRT17P6-201ENST00000453795 1220 ntBASIC12.47□□□□□ -0.41
LINC00588Q9Y4M8 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC12.47□□□□□ -0.41
LINC00588Q9Y4M8 FOSL1P1-201ENST00000511041 816 ntBASIC12.47□□□□□ -0.41
LINC00588Q9Y4M8 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC12.47□□□□□ -0.41
LINC00588Q9Y4M8 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC12.47□□□□□ -0.41
LINC00588Q9Y4M8 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC12.47□□□□□ -0.41
LINC00588Q9Y4M8 ANKRD20A8P-203ENST00000641373 517 ntBASIC12.47□□□□□ -0.41
LINC00588Q9Y4M8 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00588Q9Y4M8 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00588Q9Y4M8 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC12.47□□□□□ -0.41
LINC00588Q9Y4M8 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00588Q9Y4M8 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00588Q9Y4M8 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00588Q9Y4M8 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
LINC00588Q9Y4M8 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC12.47□□□□□ -0.41
LINC00588Q9Y4M8 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00588Q9Y4M8 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
LINC00588Q9Y4M8 GMCL1P1-201ENST00000463439 1581 ntBASIC12.47□□□□□ -0.41
LINC00588Q9Y4M8 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00588Q9Y4M8 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC12.47□□□□□ -0.41
LINC00588Q9Y4M8 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00588Q9Y4M8 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
LINC00588Q9Y4M8 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00588Q9Y4M8 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC12.47□□□□□ -0.41
LINC00588Q9Y4M8 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00588Q9Y4M8 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00588Q9Y4M8 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00588Q9Y4M8 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00588Q9Y4M8 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00588Q9Y4M8 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00588Q9Y4M8 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00588Q9Y4M8 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC12.46□□□□□ -0.41
LINC00588Q9Y4M8 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00588Q9Y4M8 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00588Q9Y4M8 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC12.46□□□□□ -0.41
LINC00588Q9Y4M8 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00588Q9Y4M8 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00588Q9Y4M8 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC12.46□□□□□ -0.41
LINC00588Q9Y4M8 LINC00602-201ENST00000629776 2065 ntBASIC12.46□□□□□ -0.41
LINC00588Q9Y4M8 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00588Q9Y4M8 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
LINC00588Q9Y4M8 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00588Q9Y4M8 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00588Q9Y4M8 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00588Q9Y4M8 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00588Q9Y4M8 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC12.46□□□□□ -0.41
LINC00588Q9Y4M8 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
LINC00588Q9Y4M8 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC12.46□□□□□ -0.41
LINC00588Q9Y4M8 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
LINC00588Q9Y4M8 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00588Q9Y4M8 ABR-204ENST00000543210 1049 ntTSL 2 BASIC12.46□□□□□ -0.41
LINC00588Q9Y4M8 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC12.46□□□□□ -0.41
LINC00588Q9Y4M8 AC111152.3-201ENST00000569699 673 ntBASIC12.46□□□□□ -0.41
LINC00588Q9Y4M8 ABR-217ENST00000572441 563 ntTSL 4 BASIC12.46□□□□□ -0.41
LINC00588Q9Y4M8 AC099336.1-202ENST00000602961 463 ntBASIC12.46□□□□□ -0.41
LINC00588Q9Y4M8 AL121772.3-201ENST00000610840 674 ntBASIC12.46□□□□□ -0.41
LINC00588Q9Y4M8 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC12.46□□□□□ -0.41
LINC00588Q9Y4M8 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00588Q9Y4M8 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00588Q9Y4M8 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00588Q9Y4M8 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00588Q9Y4M8 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00588Q9Y4M8 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
LINC00588Q9Y4M8 MCC-208ENST00000514701 2855 ntTSL 2 BASIC12.46□□□□□ -0.42
LINC00588Q9Y4M8 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC12.46□□□□□ -0.42
LINC00588Q9Y4M8 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
LINC00588Q9Y4M8 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
LINC00588Q9Y4M8 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00588Q9Y4M8 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
LINC00588Q9Y4M8 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00588Q9Y4M8 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00588Q9Y4M8 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00588Q9Y4M8 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms