Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
NCKAP1Q9Y2A7 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
NCKAP1Q9Y2A7 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
NCKAP1Q9Y2A7 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.26■□□□□ 0.51
NCKAP1Q9Y2A7 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
NCKAP1Q9Y2A7 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NCKAP1Q9Y2A7 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NCKAP1Q9Y2A7 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.26■□□□□ 0.51
NCKAP1Q9Y2A7 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.26■□□□□ 0.51
NCKAP1Q9Y2A7 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NCKAP1Q9Y2A7 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
NCKAP1Q9Y2A7 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.26■□□□□ 0.51
NCKAP1Q9Y2A7 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NCKAP1Q9Y2A7 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.26■□□□□ 0.51
NCKAP1Q9Y2A7 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NCKAP1Q9Y2A7 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.26■□□□□ 0.51
NCKAP1Q9Y2A7 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NCKAP1Q9Y2A7 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NCKAP1Q9Y2A7 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NCKAP1Q9Y2A7 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NCKAP1Q9Y2A7 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.26■□□□□ 0.51
NCKAP1Q9Y2A7 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.26■□□□□ 0.51
NCKAP1Q9Y2A7 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NCKAP1Q9Y2A7 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.26■□□□□ 0.51
NCKAP1Q9Y2A7 AL160237.2-201ENST00000556165 472 ntBASIC18.26■□□□□ 0.51
NCKAP1Q9Y2A7 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.26■□□□□ 0.51
NCKAP1Q9Y2A7 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.26■□□□□ 0.51
NCKAP1Q9Y2A7 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.26■□□□□ 0.51
NCKAP1Q9Y2A7 AL031008.1-201ENST00000619963 541 ntBASIC18.26■□□□□ 0.51
NCKAP1Q9Y2A7 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.26■□□□□ 0.51
NCKAP1Q9Y2A7 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.26■□□□□ 0.51
NCKAP1Q9Y2A7 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
NCKAP1Q9Y2A7 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
NCKAP1Q9Y2A7 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NCKAP1Q9Y2A7 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.26■□□□□ 0.51
NCKAP1Q9Y2A7 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.26■□□□□ 0.51
NCKAP1Q9Y2A7 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NCKAP1Q9Y2A7 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.26■□□□□ 0.51
NCKAP1Q9Y2A7 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.26■□□□□ 0.51
NCKAP1Q9Y2A7 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NCKAP1Q9Y2A7 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NCKAP1Q9Y2A7 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NCKAP1Q9Y2A7 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NCKAP1Q9Y2A7 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NCKAP1Q9Y2A7 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
NCKAP1Q9Y2A7 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NCKAP1Q9Y2A7 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.25■□□□□ 0.51
NCKAP1Q9Y2A7 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
NCKAP1Q9Y2A7 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NCKAP1Q9Y2A7 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.25■□□□□ 0.51
NCKAP1Q9Y2A7 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NCKAP1Q9Y2A7 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
NCKAP1Q9Y2A7 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NCKAP1Q9Y2A7 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NCKAP1Q9Y2A7 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
NCKAP1Q9Y2A7 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
NCKAP1Q9Y2A7 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.25■□□□□ 0.51
NCKAP1Q9Y2A7 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.25■□□□□ 0.51
NCKAP1Q9Y2A7 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.25■□□□□ 0.51
NCKAP1Q9Y2A7 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.25■□□□□ 0.51
NCKAP1Q9Y2A7 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
NCKAP1Q9Y2A7 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NCKAP1Q9Y2A7 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.25■□□□□ 0.51
NCKAP1Q9Y2A7 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.25■□□□□ 0.51
NCKAP1Q9Y2A7 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NCKAP1Q9Y2A7 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NCKAP1Q9Y2A7 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
NCKAP1Q9Y2A7 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
NCKAP1Q9Y2A7 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NCKAP1Q9Y2A7 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NCKAP1Q9Y2A7 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.25■□□□□ 0.51
NCKAP1Q9Y2A7 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.24■□□□□ 0.51
NCKAP1Q9Y2A7 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
NCKAP1Q9Y2A7 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NCKAP1Q9Y2A7 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NCKAP1Q9Y2A7 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NCKAP1Q9Y2A7 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.24■□□□□ 0.51
NCKAP1Q9Y2A7 AC116562.4-201ENST00000641316 2276 ntBASIC18.24■□□□□ 0.51
NCKAP1Q9Y2A7 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.24■□□□□ 0.51
NCKAP1Q9Y2A7 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
NCKAP1Q9Y2A7 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
NCKAP1Q9Y2A7 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NCKAP1Q9Y2A7 SDHAP2-201ENST00000455183 2001 ntBASIC18.24■□□□□ 0.51
NCKAP1Q9Y2A7 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NCKAP1Q9Y2A7 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NCKAP1Q9Y2A7 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NCKAP1Q9Y2A7 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.24■□□□□ 0.51
NCKAP1Q9Y2A7 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NCKAP1Q9Y2A7 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NCKAP1Q9Y2A7 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
NCKAP1Q9Y2A7 AP005901.3-202ENST00000581653 237 ntBASIC18.24■□□□□ 0.51
NCKAP1Q9Y2A7 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NCKAP1Q9Y2A7 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.24■□□□□ 0.51
NCKAP1Q9Y2A7 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
NCKAP1Q9Y2A7 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NCKAP1Q9Y2A7 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.24■□□□□ 0.51
NCKAP1Q9Y2A7 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
NCKAP1Q9Y2A7 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
NCKAP1Q9Y2A7 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NCKAP1Q9Y2A7 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms