Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 RPP21-221ENST00000428040 594 ntTSL 2 BASIC23.78■■□□□ 1.4
SPG7Q9UQ90 HNRNPDP1-201ENST00000439535 754 ntBASIC23.78■■□□□ 1.4
SPG7Q9UQ90 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SPG7Q9UQ90 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC23.78■■□□□ 1.4
SPG7Q9UQ90 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC23.78■■□□□ 1.4
SPG7Q9UQ90 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC23.78■■□□□ 1.4
SPG7Q9UQ90 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
SPG7Q9UQ90 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC23.78■■□□□ 1.4
SPG7Q9UQ90 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SPG7Q9UQ90 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SPG7Q9UQ90 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
SPG7Q9UQ90 AP005117.1-201ENST00000584346 1413 ntBASIC23.77■■□□□ 1.4
SPG7Q9UQ90 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SPG7Q9UQ90 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SPG7Q9UQ90 RPS2P28-201ENST00000314255 741 ntBASIC23.77■■□□□ 1.4
SPG7Q9UQ90 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
SPG7Q9UQ90 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC23.77■■□□□ 1.4
SPG7Q9UQ90 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC23.77■■□□□ 1.4
SPG7Q9UQ90 RBSN-204ENST00000449050 903 ntTSL 2 BASIC23.77■■□□□ 1.4
SPG7Q9UQ90 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC23.77■■□□□ 1.4
SPG7Q9UQ90 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC23.77■■□□□ 1.4
SPG7Q9UQ90 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC23.77■■□□□ 1.4
SPG7Q9UQ90 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC23.77■■□□□ 1.4
SPG7Q9UQ90 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC23.77■■□□□ 1.4
SPG7Q9UQ90 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SPG7Q9UQ90 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC23.77■■□□□ 1.4
SPG7Q9UQ90 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC23.77■■□□□ 1.4
SPG7Q9UQ90 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SPG7Q9UQ90 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SPG7Q9UQ90 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
SPG7Q9UQ90 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC23.76■■□□□ 1.39
SPG7Q9UQ90 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC23.76■■□□□ 1.39
SPG7Q9UQ90 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
SPG7Q9UQ90 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC23.76■■□□□ 1.39
SPG7Q9UQ90 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SPG7Q9UQ90 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC23.76■■□□□ 1.39
SPG7Q9UQ90 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC23.76■■□□□ 1.39
SPG7Q9UQ90 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
SPG7Q9UQ90 FUOM-202ENST00000368551 628 ntTSL 3 BASIC23.76■■□□□ 1.39
SPG7Q9UQ90 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SPG7Q9UQ90 RPL13AP23-201ENST00000480739 586 ntBASIC23.76■■□□□ 1.39
SPG7Q9UQ90 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SPG7Q9UQ90 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC23.76■■□□□ 1.39
SPG7Q9UQ90 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
SPG7Q9UQ90 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC23.76■■□□□ 1.39
SPG7Q9UQ90 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
SPG7Q9UQ90 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC23.76■■□□□ 1.39
SPG7Q9UQ90 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC23.76■■□□□ 1.39
SPG7Q9UQ90 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC23.76■■□□□ 1.39
SPG7Q9UQ90 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SPG7Q9UQ90 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
SPG7Q9UQ90 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC23.76■■□□□ 1.39
SPG7Q9UQ90 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
SPG7Q9UQ90 PTGES2-AS1-201ENST00000443493 2100 ntBASIC23.75■■□□□ 1.39
SPG7Q9UQ90 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC23.75■■□□□ 1.39
SPG7Q9UQ90 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SPG7Q9UQ90 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
SPG7Q9UQ90 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SPG7Q9UQ90 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SPG7Q9UQ90 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SPG7Q9UQ90 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC23.75■■□□□ 1.39
SPG7Q9UQ90 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
SPG7Q9UQ90 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SPG7Q9UQ90 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
SPG7Q9UQ90 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SPG7Q9UQ90 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC23.75■■□□□ 1.39
SPG7Q9UQ90 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
SPG7Q9UQ90 KRT18P13-201ENST00000400056 1290 ntBASIC23.75■■□□□ 1.39
SPG7Q9UQ90 ABCD1P5-201ENST00000445663 754 ntBASIC23.75■■□□□ 1.39
SPG7Q9UQ90 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC23.75■■□□□ 1.39
SPG7Q9UQ90 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SPG7Q9UQ90 RPL18-209ENST00000550645 463 ntTSL 5 BASIC23.75■■□□□ 1.39
SPG7Q9UQ90 RPL18-214ENST00000552588 559 ntTSL 3 BASIC23.75■■□□□ 1.39
SPG7Q9UQ90 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SPG7Q9UQ90 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC23.75■■□□□ 1.39
SPG7Q9UQ90 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC23.75■■□□□ 1.39
SPG7Q9UQ90 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC23.75■■□□□ 1.39
SPG7Q9UQ90 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
SPG7Q9UQ90 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
SPG7Q9UQ90 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
SPG7Q9UQ90 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SPG7Q9UQ90 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
SPG7Q9UQ90 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SPG7Q9UQ90 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SPG7Q9UQ90 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
SPG7Q9UQ90 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC23.74■■□□□ 1.39
SPG7Q9UQ90 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SPG7Q9UQ90 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SPG7Q9UQ90 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
SPG7Q9UQ90 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
SPG7Q9UQ90 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC23.74■■□□□ 1.39
SPG7Q9UQ90 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC23.74■■□□□ 1.39
SPG7Q9UQ90 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC23.74■■□□□ 1.39
SPG7Q9UQ90 AC139530.3-201ENST00000620344 690 ntBASIC23.74■■□□□ 1.39
SPG7Q9UQ90 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SPG7Q9UQ90 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
SPG7Q9UQ90 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SPG7Q9UQ90 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC23.74■■□□□ 1.39
SPG7Q9UQ90 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SPG7Q9UQ90 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms