Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NPIPA1Q9UND3 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.84■□□□□ 0.29
NPIPA1Q9UND3 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
NPIPA1Q9UND3 RNF165-205ENST00000588679 2904 ntBASIC16.84■□□□□ 0.29
NPIPA1Q9UND3 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPIPA1Q9UND3 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPIPA1Q9UND3 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.84■□□□□ 0.29
NPIPA1Q9UND3 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.84■□□□□ 0.29
NPIPA1Q9UND3 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.84■□□□□ 0.29
NPIPA1Q9UND3 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPIPA1Q9UND3 KRT8P26-201ENST00000534154 1276 ntBASIC16.84■□□□□ 0.29
NPIPA1Q9UND3 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.84■□□□□ 0.29
NPIPA1Q9UND3 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.84■□□□□ 0.29
NPIPA1Q9UND3 AC010240.3-201ENST00000607688 395 ntBASIC16.84■□□□□ 0.29
NPIPA1Q9UND3 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.84■□□□□ 0.29
NPIPA1Q9UND3 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.84■□□□□ 0.29
NPIPA1Q9UND3 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.84■□□□□ 0.29
NPIPA1Q9UND3 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.84■□□□□ 0.29
NPIPA1Q9UND3 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPIPA1Q9UND3 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NPIPA1Q9UND3 HEIH-201ENST00000623091 1652 ntBASIC16.84■□□□□ 0.29
NPIPA1Q9UND3 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPIPA1Q9UND3 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.84■□□□□ 0.29
NPIPA1Q9UND3 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPIPA1Q9UND3 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPIPA1Q9UND3 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
NPIPA1Q9UND3 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
NPIPA1Q9UND3 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
NPIPA1Q9UND3 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NPIPA1Q9UND3 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
NPIPA1Q9UND3 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NPIPA1Q9UND3 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.83■□□□□ 0.28
NPIPA1Q9UND3 MIR564-202ENST00000385049 94 ntBASIC16.83■□□□□ 0.28
NPIPA1Q9UND3 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
NPIPA1Q9UND3 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NPIPA1Q9UND3 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NPIPA1Q9UND3 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
NPIPA1Q9UND3 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
NPIPA1Q9UND3 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NPIPA1Q9UND3 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.83■□□□□ 0.28
NPIPA1Q9UND3 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.83■□□□□ 0.28
NPIPA1Q9UND3 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
NPIPA1Q9UND3 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.28
NPIPA1Q9UND3 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
NPIPA1Q9UND3 KRT8P7-201ENST00000533003 1432 ntBASIC16.83■□□□□ 0.28
NPIPA1Q9UND3 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
NPIPA1Q9UND3 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.83■□□□□ 0.28
NPIPA1Q9UND3 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NPIPA1Q9UND3 AP002414.4-201ENST00000589764 1148 ntBASIC16.83■□□□□ 0.28
NPIPA1Q9UND3 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NPIPA1Q9UND3 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.83■□□□□ 0.28
NPIPA1Q9UND3 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.83■□□□□ 0.28
NPIPA1Q9UND3 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
NPIPA1Q9UND3 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NPIPA1Q9UND3 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NPIPA1Q9UND3 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPIPA1Q9UND3 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPIPA1Q9UND3 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPIPA1Q9UND3 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPIPA1Q9UND3 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
NPIPA1Q9UND3 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPIPA1Q9UND3 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
NPIPA1Q9UND3 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPIPA1Q9UND3 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.82■□□□□ 0.28
NPIPA1Q9UND3 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPIPA1Q9UND3 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.82■□□□□ 0.28
NPIPA1Q9UND3 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.82■□□□□ 0.28
NPIPA1Q9UND3 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.82■□□□□ 0.28
NPIPA1Q9UND3 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPIPA1Q9UND3 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.82■□□□□ 0.28
NPIPA1Q9UND3 TSPY22P-201ENST00000427496 604 ntBASIC16.82■□□□□ 0.28
NPIPA1Q9UND3 AP002383.4-201ENST00000442518 975 ntBASIC16.82■□□□□ 0.28
NPIPA1Q9UND3 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.82■□□□□ 0.28
NPIPA1Q9UND3 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.82■□□□□ 0.28
NPIPA1Q9UND3 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.82■□□□□ 0.28
NPIPA1Q9UND3 AC104390.1-201ENST00000555663 520 ntBASIC16.82■□□□□ 0.28
NPIPA1Q9UND3 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.82■□□□□ 0.28
NPIPA1Q9UND3 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC16.82■□□□□ 0.28
NPIPA1Q9UND3 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPIPA1Q9UND3 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPIPA1Q9UND3 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPIPA1Q9UND3 WIZP1-201ENST00000531444 2299 ntBASIC16.82■□□□□ 0.28
NPIPA1Q9UND3 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPIPA1Q9UND3 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPIPA1Q9UND3 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPIPA1Q9UND3 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPIPA1Q9UND3 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPIPA1Q9UND3 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPIPA1Q9UND3 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.82■□□□□ 0.28
NPIPA1Q9UND3 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.81■□□□□ 0.28
NPIPA1Q9UND3 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPA1Q9UND3 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPA1Q9UND3 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
NPIPA1Q9UND3 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPA1Q9UND3 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.81■□□□□ 0.28
NPIPA1Q9UND3 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
NPIPA1Q9UND3 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPA1Q9UND3 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
NPIPA1Q9UND3 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPA1Q9UND3 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms